Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.5□□□□□ -2.17
CISHQ9NSE2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.5□□□□□ -2.17
CISHQ9NSE2 RNU6-486P-201ENST00000363116 107 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 RNU6-359P-201ENST00000365466 108 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 HMGN2P39-201ENST00000398005 273 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 SNORD56-201ENST00000413522 71 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 AL451054.2-201ENST00000420896 202 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 DPRXP1-201ENST00000426312 460 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 MTCO3P43-201ENST00000440974 771 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 AC104058.1-201ENST00000448028 297 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.5□□□□□ -2.17
CISHQ9NSE2 AL160314.1-201ENST00000490836 438 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.5□□□□□ -2.17
CISHQ9NSE2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.5□□□□□ -2.17
CISHQ9NSE2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.5□□□□□ -2.17
CISHQ9NSE2 RNA5SP137-201ENST00000516833 135 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 OR5AL2P-201ENST00000532185 920 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 AL731537.2-201ENST00000561565 951 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 AC138915.2-201ENST00000569776 97 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 AC024619.4-201ENST00000580924 316 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 AC090330.1-201ENST00000588646 764 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 AC106052.1-201ENST00000608029 497 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 AL121652.1-201ENST00000608851 448 ntBASIC1.5□□□□□ -2.17
CISHQ9NSE2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
CISHQ9NSE2 AL138713.1-201ENST00000624026 2130 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 SNORA23-201ENST00000365128 182 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 RNU6-637P-201ENST00000384050 107 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 RNU6-748P-201ENST00000384648 107 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 RNA5SP450-201ENST00000411206 102 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 SNRPEP9-201ENST00000436794 238 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 HSPE1P21-201ENST00000438283 308 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 AC002381.1-201ENST00000447049 280 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 MTND1P9-201ENST00000453775 944 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 snoU13.8-201ENST00000458890 104 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 AC020699.1-201ENST00000505161 445 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 AL161670.1-201ENST00000554348 137 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 LINC00933-203ENST00000559812 219 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 MIR4769-201ENST00000584126 77 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 MIR4765-201ENST00000585007 77 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 AC243960.4-201ENST00000600532 288 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 AC007038.2-201ENST00000608095 740 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 AL359757.2-201ENST00000624309 274 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.49□□□□□ -2.17
CISHQ9NSE2 MIR3199-2-201ENST00000636243 86 ntBASIC1.49□□□□□ -2.17
CISHQ9NSE2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CISHQ9NSE2 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CISHQ9NSE2 MTND5P10-201ENST00000603719 1809 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 ZNF209P-201ENST00000593450 2304 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 Y_RNA.234-201ENST00000364409 97 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 RNU6-1078P-201ENST00000364522 103 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 DHFRP6-201ENST00000401776 268 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 AL356421.1-201ENST00000403255 413 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 RPL26P27-201ENST00000414397 437 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 RPS24P7-201ENST00000416921 246 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 MTCYBP38-201ENST00000417160 1123 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 AL158823.1-201ENST00000418441 478 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 IFNA20P-201ENST00000436840 528 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 HMGB1P31-201ENST00000437242 427 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 HMGB1P18-201ENST00000438801 619 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 DNAJC19P4-201ENST00000440115 345 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 AC093155.1-201ENST00000440164 826 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 AL158053.1-201ENST00000441503 453 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 MOB1AP2-201ENST00000446060 614 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 RPL7P12-201ENST00000446719 750 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.48□□□□□ -2.17
CISHQ9NSE2 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.48□□□□□ -2.17
CISHQ9NSE2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
CISHQ9NSE2 MRPS33P3-201ENST00000513456 322 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.48□□□□□ -2.17
CISHQ9NSE2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.48□□□□□ -2.17
CISHQ9NSE2 AL138963.2-201ENST00000605137 226 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 AL512598.1-201ENST00000610158 273 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
CISHQ9NSE2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.48□□□□□ -2.17
CISHQ9NSE2 U2.21-201ENST00000637295 81 ntBASIC1.48□□□□□ -2.17
CISHQ9NSE2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CISHQ9NSE2 AL359854.1-201ENST00000614203 1594 ntBASIC1.47□□□□□ -2.17
CISHQ9NSE2 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CISHQ9NSE2 AL356432.1-201ENST00000405809 419 ntBASIC1.47□□□□□ -2.17
CISHQ9NSE2 RN7SKP51-201ENST00000410781 304 ntBASIC1.47□□□□□ -2.17
CISHQ9NSE2 RPS20P15-201ENST00000412792 311 ntBASIC1.47□□□□□ -2.17
CISHQ9NSE2 AC007435.1-201ENST00000421086 415 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 265.6 ms