Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC011611.1-201ENST00000552179 197 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.08□□□□□ -1.76
VTA1Q9NP79 AL118558.2-201ENST00000556294 238 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.08□□□□□ -1.76
VTA1Q9NP79 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.08□□□□□ -1.76
VTA1Q9NP79 MIR4719-201ENST00000585233 84 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 AC073544.1-201ENST00000600110 1595 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 AC087045.1-201ENST00000605856 382 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 AL512643.1-201ENST00000635735 524 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VTA1Q9NP79 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VTA1Q9NP79 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
VTA1Q9NP79 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
VTA1Q9NP79 HSPA8P4-201ENST00000511877 1920 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
VTA1Q9NP79 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VTA1Q9NP79 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.07□□□□□ -1.76
VTA1Q9NP79 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VTA1Q9NP79 Y_RNA.61-201ENST00000362835 102 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 Y_RNA.212-201ENST00000364177 102 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 RNU6-512P-201ENST00000364438 103 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 RNU6-45P-201ENST00000384471 107 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 SNORA16.2-201ENST00000390991 127 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.07□□□□□ -1.76
VTA1Q9NP79 BX682237.1-201ENST00000415016 335 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 BTF3L4P3-201ENST00000418879 476 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 PDCL2P1-201ENST00000419302 352 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 MTND4P28-201ENST00000426217 387 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.07□□□□□ -1.76
VTA1Q9NP79 ATP5HP2-201ENST00000433885 485 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.07□□□□□ -1.76
VTA1Q9NP79 HMGB1P30-201ENST00000492455 606 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.07□□□□□ -1.76
VTA1Q9NP79 RNU4-49P-201ENST00000516080 140 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 SNORA70.18-201ENST00000516696 98 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.07□□□□□ -1.76
VTA1Q9NP79 AC090115.3-201ENST00000553218 849 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 ZNF192P1-203ENST00000565888 810 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.07□□□□□ -1.76
VTA1Q9NP79 MIR4742-201ENST00000581069 85 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 AC005498.1-201ENST00000592125 465 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 BNIP3P25-201ENST00000596023 559 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 AC006077.1-201ENST00000604746 343 ntBASIC4.07□□□□□ -1.76
VTA1Q9NP79 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.07□□□□□ -1.76
VTA1Q9NP79 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
VTA1Q9NP79 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VTA1Q9NP79 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VTA1Q9NP79 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
VTA1Q9NP79 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VTA1Q9NP79 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 Y_RNA.167-201ENST00000363735 109 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 AC063979.1-201ENST00000415539 377 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 RPLP0P7-201ENST00000416050 667 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 AC092047.1-201ENST00000424997 240 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 AL592045.1-201ENST00000429867 352 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 AC005019.1-201ENST00000436455 431 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 NDUFB4P6-201ENST00000436819 366 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 PRPS1P1-201ENST00000445305 876 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 RPL21P93-201ENST00000480465 489 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 AC008716.1-201ENST00000511084 513 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 TTC39CP1-201ENST00000512513 755 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VTA1Q9NP79 RNU6-864P-201ENST00000516256 108 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 RNA5SP471-201ENST00000516971 106 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 AC090136.1-201ENST00000520009 240 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 AL157871.3-201ENST00000557231 293 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 MIR5583-1-201ENST00000580941 59 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 Z99571.1-201ENST00000636677 394 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VTA1Q9NP79 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VTA1Q9NP79 MAPK10-373ENST00000641983 6772 ntBASIC4.06□□□□□ -1.76
VTA1Q9NP79 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
VTA1Q9NP79 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
VTA1Q9NP79 AL049641.1-201ENST00000441055 1948 ntBASIC4.05□□□□□ -1.76
VTA1Q9NP79 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
VTA1Q9NP79 FAM35BP-202ENST00000497389 3337 ntBASIC4.05□□□□□ -1.76
VTA1Q9NP79 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
VTA1Q9NP79 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VTA1Q9NP79 Y_RNA.33-201ENST00000362591 102 ntBASIC4.05□□□□□ -1.76
VTA1Q9NP79 RNU6-831P-201ENST00000384548 107 ntBASIC4.05□□□□□ -1.76
VTA1Q9NP79 RNA5SP219-201ENST00000390940 113 ntBASIC4.05□□□□□ -1.76
VTA1Q9NP79 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.05□□□□□ -1.76
VTA1Q9NP79 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.05□□□□□ -1.76
VTA1Q9NP79 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.05□□□□□ -1.76
VTA1Q9NP79 PIGFP3-201ENST00000441918 722 ntBASIC4.05□□□□□ -1.76
VTA1Q9NP79 DYNLL1P5-201ENST00000467158 270 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms