Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC022655.2-201ENST00000577280 318 ntBASIC4.1□□□□□ -1.75
VPS11Q9H270 AC078899.3-201ENST00000599065 212 ntBASIC4.1□□□□□ -1.75
VPS11Q9H270 AC092447.9-201ENST00000603395 144 ntBASIC4.1□□□□□ -1.75
VPS11Q9H270 AL355297.3-201ENST00000604082 446 ntBASIC4.1□□□□□ -1.75
VPS11Q9H270 FAM27D1-201ENST00000612308 341 ntBASIC4.1□□□□□ -1.75
VPS11Q9H270 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS11Q9H270 AP001486.3-201ENST00000615334 372 ntBASIC4.1□□□□□ -1.75
VPS11Q9H270 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS11Q9H270 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.1□□□□□ -1.75
VPS11Q9H270 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VPS11Q9H270 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VPS11Q9H270 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
VPS11Q9H270 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
VPS11Q9H270 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
VPS11Q9H270 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
VPS11Q9H270 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.1□□□□□ -1.75
VPS11Q9H270 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS11Q9H270 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
VPS11Q9H270 AC010615.1-201ENST00000594254 1764 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 SDAD1P2-201ENST00000441308 2028 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 AC116667.1-201ENST00000604855 2072 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS11Q9H270 RNU6-490P-201ENST00000362985 107 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 RNU6-511P-201ENST00000363496 107 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 Y_RNA.210-201ENST00000364161 110 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 Y_RNA.222-201ENST00000364264 102 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 RNA5SP505-201ENST00000364748 108 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS11Q9H270 RNU6-641P-201ENST00000384006 107 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VPS11Q9H270 EIF4E2P1-201ENST00000393781 255 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 RNU6-101P-201ENST00000410323 104 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 Y_RNA.594-201ENST00000410373 140 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 RN7SKP159-201ENST00000410657 292 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 RNU2-38P-201ENST00000410856 79 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 FAR2P2-201ENST00000413041 594 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 RPL21P24-201ENST00000413752 448 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 AC243428.1-201ENST00000421099 264 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 RPL27AP8-201ENST00000424277 446 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 RPS15AP10-201ENST00000432472 382 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 CYCSP43-201ENST00000438233 310 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS11Q9H270 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS11Q9H270 HMGN2P16-201ENST00000456802 261 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS11Q9H270 RN7SL93P-201ENST00000463035 293 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS11Q9H270 HSPE1P6-201ENST00000479457 291 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 RN7SL691P-201ENST00000494487 301 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 AC116337.1-201ENST00000509680 687 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS11Q9H270 RNU6-138P-201ENST00000515952 107 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 AC100870.1-201ENST00000522035 505 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.09□□□□□ -1.75
VPS11Q9H270 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS11Q9H270 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS11Q9H270 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS11Q9H270 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VPS11Q9H270 AC125232.2-201ENST00000592457 143 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS11Q9H270 AP002826.1-201ENST00000608835 315 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 AL021879.1-201ENST00000611756 288 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS11Q9H270 MIR6128-201ENST00000615528 109 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 AC010378.1-201ENST00000619270 362 ntBASIC4.09□□□□□ -1.75
VPS11Q9H270 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS11Q9H270 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VPS11Q9H270 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS11Q9H270 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS11Q9H270 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS11Q9H270 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
VPS11Q9H270 NCAPGP1-201ENST00000505112 1814 ntBASIC4.09□□□□□ -1.76
VPS11Q9H270 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
VPS11Q9H270 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.09□□□□□ -1.76
VPS11Q9H270 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VPS11Q9H270 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS11Q9H270 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS11Q9H270 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VPS11Q9H270 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS11Q9H270 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS11Q9H270 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS11Q9H270 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS11Q9H270 RNU5A-1-201ENST00000362698 116 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 SNORD35B-201ENST00000363660 87 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 U3.11-201ENST00000364476 212 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS11Q9H270 Y_RNA.461-201ENST00000384263 103 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 SNORA36C-201ENST00000384289 132 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 Y_RNA.483-201ENST00000384380 101 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VPS11Q9H270 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VPS11Q9H270 HMGN2P8-201ENST00000391458 268 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 AL391417.1-201ENST00000404100 426 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 RNU6-1050P-201ENST00000410388 107 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 RNA5SP107-201ENST00000411358 122 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 PGBD4P6-201ENST00000421501 610 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 RPS29P17-201ENST00000430795 166 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms