Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 RNU6-1035P-201ENST00000384477 107 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 Y_RNA.534-201ENST00000384599 112 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AL357552.1-201ENST00000445254 415 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AL049830.2-201ENST00000480072 201 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AC233702.1-201ENST00000482905 502 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AC109927.2-201ENST00000506416 303 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AC079140.5-201ENST00000507882 310 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 PCBP2P3-201ENST00000509726 843 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AC006445.2-201ENST00000510061 472 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 RNU6-835P-201ENST00000516974 104 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 RNU6-1231P-201ENST00000517185 103 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 MIR4474-201ENST00000579189 78 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 MIR5047-201ENST00000579212 100 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AC068944.2-201ENST00000610373 403 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 AC005183.1-201ENST00000603687 1979 ntBASIC4.02□□□□□ -1.77
RTFDC1Q9BY42 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 RNU6-552P-201ENST00000362869 119 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 RNU6-395P-201ENST00000365662 106 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 RNU6-217P-201ENST00000384164 104 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 SNORA7.4-201ENST00000384249 137 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 RNU6-140P-201ENST00000384566 108 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 RNU6-780P-201ENST00000391030 104 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 RNU6-550P-201ENST00000391057 101 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 CISD1P1-201ENST00000393907 327 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 RNU2-68P-201ENST00000410878 191 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AL160275.3-201ENST00000423876 471 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AL592045.1-201ENST00000429867 352 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AL162395.1-201ENST00000457882 422 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 RPS4XP2-201ENST00000458402 793 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AC092798.1-201ENST00000458542 409 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AL117351.2-201ENST00000513571 157 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 LRRC34P2-201ENST00000514850 553 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 RNU6-1315P-201ENST00000517187 99 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 MTND1P35-201ENST00000526739 508 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AMZ2P1-203ENST00000565833 850 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 MIR5692A1-201ENST00000580523 69 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AL355598.1-201ENST00000604169 202 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AC136601.2-201ENST00000604356 474 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 MIR15A-201ENST00000607334 83 ntBASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RTFDC1Q9BY42 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
RTFDC1Q9BY42 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RTFDC1Q9BY42 AL139397.2-201ENST00000404529 772 ntBASIC4□□□□□ -1.77
RTFDC1Q9BY42 RNA5SP118-201ENST00000410385 109 ntBASIC4□□□□□ -1.77
RTFDC1Q9BY42 AC092809.3-201ENST00000415453 231 ntBASIC4□□□□□ -1.77
RTFDC1Q9BY42 ARL5AP1-201ENST00000418991 388 ntBASIC4□□□□□ -1.77
RTFDC1Q9BY42 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4□□□□□ -1.77
RTFDC1Q9BY42 RPL36AP53-201ENST00000432891 316 ntBASIC4□□□□□ -1.77
RTFDC1Q9BY42 SNRPEP9-201ENST00000436794 238 ntBASIC4□□□□□ -1.77
RTFDC1Q9BY42 ELOCP23-201ENST00000452014 332 ntBASIC4□□□□□ -1.77
RTFDC1Q9BY42 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4□□□□□ -1.77
RTFDC1Q9BY42 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4□□□□□ -1.77
RTFDC1Q9BY42 AC026801.1-201ENST00000497178 464 ntBASIC4□□□□□ -1.77
RTFDC1Q9BY42 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4□□□□□ -1.77
RTFDC1Q9BY42 AF213884.2-201ENST00000510417 903 ntBASIC4□□□□□ -1.77
RTFDC1Q9BY42 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4□□□□□ -1.77
RTFDC1Q9BY42 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4□□□□□ -1.77
RTFDC1Q9BY42 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4□□□□□ -1.77
RTFDC1Q9BY42 AP002404.1-201ENST00000532005 451 ntBASIC4□□□□□ -1.77
RTFDC1Q9BY42 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4□□□□□ -1.77
RTFDC1Q9BY42 MIR2682-201ENST00000580305 110 ntBASIC4□□□□□ -1.77
RTFDC1Q9BY42 MIR3941-201ENST00000582572 103 ntBASIC4□□□□□ -1.77
RTFDC1Q9BY42 AC099506.2-201ENST00000623074 221 ntBASIC4□□□□□ -1.77
RTFDC1Q9BY42 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4□□□□□ -1.77
RTFDC1Q9BY42 Z99571.1-201ENST00000636677 394 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms