Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AL445189.1-201ENST00000405722 338 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.59□□□□□ -1.99
VGLL1Q99990 RN7SKP123-201ENST00000410732 291 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 EEF1A1P40-201ENST00000412883 573 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 AC093578.1-201ENST00000415219 368 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.59□□□□□ -1.99
VGLL1Q99990 EI24P1-201ENST00000416584 867 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 AL356968.1-201ENST00000416622 474 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 HSPE1P1-201ENST00000421494 318 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.59□□□□□ -1.99
VGLL1Q99990 CALM2P2-201ENST00000428512 440 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.59□□□□□ -1.99
VGLL1Q99990 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.59□□□□□ -1.99
VGLL1Q99990 HMGB3P11-201ENST00000440127 604 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.59□□□□□ -1.99
VGLL1Q99990 NEFMP1-201ENST00000443423 1006 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 RPS15AP27-201ENST00000449183 343 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.59□□□□□ -1.99
VGLL1Q99990 HMGN1P18-201ENST00000457642 277 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 RPL23AP67-201ENST00000465341 474 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 AC010285.1-201ENST00000470580 392 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 HSPE1P6-201ENST00000479457 291 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 AC021205.2-201ENST00000480069 347 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 AC083904.1-201ENST00000487828 231 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.59□□□□□ -1.99
VGLL1Q99990 KLHL2P1-201ENST00000508691 521 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.59□□□□□ -1.99
VGLL1Q99990 RNU6-390P-201ENST00000516259 103 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 RN7SKP256-201ENST00000517201 314 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 MTND4P7-201ENST00000523876 130 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.59□□□□□ -1.99
VGLL1Q99990 AC011611.1-201ENST00000552179 197 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 ANP32BP3-201ENST00000559213 706 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 MTCO3P23-201ENST00000561363 289 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 AC026464.5-201ENST00000562497 722 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.59□□□□□ -1.99
VGLL1Q99990 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 FAM60BP-201ENST00000578364 658 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.59□□□□□ -1.99
VGLL1Q99990 AC044792.1-201ENST00000593294 196 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.59□□□□□ -1.99
VGLL1Q99990 AC174048.1-201ENST00000603389 144 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 MTND5P42-201ENST00000637720 498 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -2
VGLL1Q99990 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -2
VGLL1Q99990 AC032011.1-201ENST00000611703 1549 ntBASIC2.58□□□□□ -2
VGLL1Q99990 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
VGLL1Q99990 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
VGLL1Q99990 RNU6-1287P-201ENST00000362914 107 ntBASIC2.58□□□□□ -2
VGLL1Q99990 RNU6-82P-201ENST00000363970 107 ntBASIC2.58□□□□□ -2
VGLL1Q99990 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
VGLL1Q99990 RNU6-1060P-201ENST00000384664 107 ntBASIC2.58□□□□□ -2
VGLL1Q99990 U8.11-201ENST00000384699 133 ntBASIC2.58□□□□□ -2
VGLL1Q99990 U8.12-201ENST00000384701 133 ntBASIC2.58□□□□□ -2
VGLL1Q99990 SNORA16.2-201ENST00000390991 127 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AL592114.1-201ENST00000403842 483 ntBASIC2.58□□□□□ -2
VGLL1Q99990 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.58□□□□□ -2
VGLL1Q99990 Z99755.1-201ENST00000414048 380 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AC009161.1-201ENST00000417306 376 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AL451054.2-201ENST00000420896 202 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.58□□□□□ -2
VGLL1Q99990 AL669831.1-202ENST00000428504 417 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AL365400.1-201ENST00000431854 640 ntBASIC2.58□□□□□ -2
VGLL1Q99990 GTF2IP13-201ENST00000438487 386 ntBASIC2.58□□□□□ -2
VGLL1Q99990 HMGB1P18-201ENST00000438801 619 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.58□□□□□ -2
VGLL1Q99990 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.58□□□□□ -2
VGLL1Q99990 AC233279.1-201ENST00000455300 423 ntBASIC2.58□□□□□ -2
VGLL1Q99990 SCARNA18-201ENST00000459004 134 ntBASIC2.58□□□□□ -2
VGLL1Q99990 U8.18-201ENST00000459285 133 ntBASIC2.58□□□□□ -2
VGLL1Q99990 RPL21P8-201ENST00000465083 535 ntBASIC2.58□□□□□ -2
VGLL1Q99990 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.58□□□□□ -2
VGLL1Q99990 Y_RNA.654-201ENST00000497848 106 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.58□□□□□ -2
VGLL1Q99990 AC009901.1-201ENST00000506703 541 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.58□□□□□ -2
VGLL1Q99990 Y_RNA.689-201ENST00000516589 107 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AC245166.1-201ENST00000521012 253 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.58□□□□□ -2
VGLL1Q99990 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.58□□□□□ -2
VGLL1Q99990 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.58□□□□□ -2
VGLL1Q99990 MIR3942-201ENST00000585264 109 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AC104763.2-201ENST00000604179 382 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.58□□□□□ -2
VGLL1Q99990 AL050343.2-201ENST00000607338 280 ntBASIC2.58□□□□□ -2
VGLL1Q99990 uc_338.5-201ENST00000611839 155 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AL442067.2-201ENST00000614033 363 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AL360181.4-201ENST00000621752 134 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AP003400.5-201ENST00000624827 617 ntBASIC2.58□□□□□ -2
VGLL1Q99990 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
VGLL1Q99990 MFSD8-233ENST00000641482 4860 ntBASIC2.58□□□□□ -2
VGLL1Q99990 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VGLL1Q99990 AC004925.1-201ENST00000624256 2706 ntBASIC2.57□□□□□ -2
VGLL1Q99990 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.57□□□□□ -2
VGLL1Q99990 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.57□□□□□ -2
VGLL1Q99990 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
VGLL1Q99990 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.57□□□□□ -2
VGLL1Q99990 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VGLL1Q99990 Y_RNA.58-201ENST00000362807 102 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms