Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ABCA3Q99758 AC018630.2-201ENST00000534866 2403 ntBASIC1.17□□□□□ -2.22
ABCA3Q99758 DEFB108F-201ENST00000344638 222 ntBASIC1.17□□□□□ -2.22
ABCA3Q99758 RNU6-115P-201ENST00000364310 107 ntBASIC1.17□□□□□ -2.22
ABCA3Q99758 RNA5SP212-201ENST00000391223 107 ntBASIC1.17□□□□□ -2.22
ABCA3Q99758 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.17□□□□□ -2.22
ABCA3Q99758 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.17□□□□□ -2.22
ABCA3Q99758 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
ABCA3Q99758 AC008269.2-201ENST00000561915 1105 ntBASIC1.17□□□□□ -2.22
ABCA3Q99758 AC003001.2-201ENST00000616294 831 ntBASIC1.17□□□□□ -2.22
ABCA3Q99758 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.16□□□□□ -2.22
ABCA3Q99758 RPL27AP8-201ENST00000424277 446 ntBASIC1.16□□□□□ -2.22
ABCA3Q99758 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.16□□□□□ -2.22
ABCA3Q99758 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.16□□□□□ -2.22
ABCA3Q99758 AC093770.1-201ENST00000511559 571 ntBASIC1.16□□□□□ -2.22
ABCA3Q99758 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.16□□□□□ -2.22
ABCA3Q99758 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.16□□□□□ -2.22
ABCA3Q99758 RNU6-970P-201ENST00000516312 107 ntBASIC1.16□□□□□ -2.22
ABCA3Q99758 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.16□□□□□ -2.22
ABCA3Q99758 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.16□□□□□ -2.22
ABCA3Q99758 MIR4504-201ENST00000577413 92 ntBASIC1.16□□□□□ -2.22
ABCA3Q99758 MIR4299-201ENST00000577899 72 ntBASIC1.16□□□□□ -2.22
ABCA3Q99758 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.16□□□□□ -2.22
ABCA3Q99758 RNU6-955P-201ENST00000410497 104 ntBASIC1.15□□□□□ -2.22
ABCA3Q99758 RPL21P90-201ENST00000415692 466 ntBASIC1.15□□□□□ -2.22
ABCA3Q99758 AC018630.2-202ENST00000422992 927 ntBASIC1.15□□□□□ -2.22
ABCA3Q99758 RNU1-98P-201ENST00000458992 160 ntBASIC1.15□□□□□ -2.22
ABCA3Q99758 RNU7-23P-201ENST00000459465 62 ntBASIC1.15□□□□□ -2.22
ABCA3Q99758 AC107626.1-201ENST00000471084 183 ntBASIC1.15□□□□□ -2.22
ABCA3Q99758 RPS27AP10-201ENST00000496103 208 ntBASIC1.15□□□□□ -2.22
ABCA3Q99758 AC093752.1-206ENST00000511823 336 ntBASIC1.15□□□□□ -2.22
ABCA3Q99758 SCARNA11.3-201ENST00000517276 130 ntBASIC1.15□□□□□ -2.22
ABCA3Q99758 AC010186.2-204ENST00000537668 439 ntBASIC1.15□□□□□ -2.22
ABCA3Q99758 HMGB1P14-201ENST00000557424 591 ntBASIC1.15□□□□□ -2.22
ABCA3Q99758 AL118508.4-201ENST00000624142 1176 ntBASIC1.15□□□□□ -2.22
ABCA3Q99758 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
ABCA3Q99758 Y_RNA.294-201ENST00000364916 102 ntBASIC1.15□□□□□ -2.23
ABCA3Q99758 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.15□□□□□ -2.23
ABCA3Q99758 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.15□□□□□ -2.23
ABCA3Q99758 AC092573.2-201ENST00000434546 243 ntBASIC1.15□□□□□ -2.23
ABCA3Q99758 PNPLA4P1-201ENST00000458328 305 ntBASIC1.15□□□□□ -2.23
ABCA3Q99758 RPL31P60-201ENST00000478450 367 ntBASIC1.15□□□□□ -2.23
ABCA3Q99758 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
ABCA3Q99758 MRPS33P3-201ENST00000513456 322 ntBASIC1.15□□□□□ -2.23
ABCA3Q99758 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.15□□□□□ -2.23
ABCA3Q99758 MTCYBP27-201ENST00000555160 670 ntBASIC1.15□□□□□ -2.23
ABCA3Q99758 AC011260.1-201ENST00000578420 472 ntBASIC1.15□□□□□ -2.23
ABCA3Q99758 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.15□□□□□ -2.23
ABCA3Q99758 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.14□□□□□ -2.23
ABCA3Q99758 RNU6-167P-201ENST00000384292 106 ntBASIC1.14□□□□□ -2.23
ABCA3Q99758 AL139397.2-201ENST00000404529 772 ntBASIC1.14□□□□□ -2.23
ABCA3Q99758 AC079780.1-201ENST00000428259 207 ntBASIC1.14□□□□□ -2.23
ABCA3Q99758 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.14□□□□□ -2.23
ABCA3Q99758 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.14□□□□□ -2.23
ABCA3Q99758 snoU109.1-201ENST00000459339 135 ntBASIC1.14□□□□□ -2.23
ABCA3Q99758 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.14□□□□□ -2.23
ABCA3Q99758 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.14□□□□□ -2.23
ABCA3Q99758 MIR3198-2-201ENST00000577868 80 ntBASIC1.14□□□□□ -2.23
ABCA3Q99758 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.14□□□□□ -2.23
ABCA3Q99758 RNU4-23P-201ENST00000362839 140 ntBASIC1.13□□□□□ -2.23
ABCA3Q99758 MTATP6P31-201ENST00000406985 692 ntBASIC1.13□□□□□ -2.23
ABCA3Q99758 AL358176.2-201ENST00000425769 204 ntBASIC1.13□□□□□ -2.23
ABCA3Q99758 HMGB1P9-201ENST00000429856 646 ntBASIC1.13□□□□□ -2.23
ABCA3Q99758 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.13□□□□□ -2.23
ABCA3Q99758 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
ABCA3Q99758 SNORA48.10-201ENST00000516965 160 ntBASIC1.13□□□□□ -2.23
ABCA3Q99758 AC104229.1-201ENST00000561364 255 ntBASIC1.13□□□□□ -2.23
ABCA3Q99758 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.13□□□□□ -2.23
ABCA3Q99758 AC010615.3-201ENST00000597319 394 ntBASIC1.13□□□□□ -2.23
ABCA3Q99758 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
ABCA3Q99758 VTRNA1-3-201ENST00000365645 89 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 AL109913.1-201ENST00000421173 514 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 AL589880.1-201ENST00000448271 287 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.12□□□□□ -2.23
ABCA3Q99758 AP003072.2-201ENST00000527756 676 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.12□□□□□ -2.23
ABCA3Q99758 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ABCA3Q99758 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
ABCA3Q99758 RNA5SP276-201ENST00000362580 94 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 AL158823.1-201ENST00000418441 478 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 KLF3P2-201ENST00000465138 268 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 AC104164.3-201ENST00000467363 1258 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 AC104806.1-201ENST00000508720 308 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 AC008834.1-201ENST00000511612 175 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 AC084033.1-201ENST00000550830 633 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.12□□□□□ -2.23
ABCA3Q99758 MIR2909-201ENST00000617113 69 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 MIR6086-201ENST00000638065 55 ntBASIC1.12□□□□□ -2.23
ABCA3Q99758 AC009541.1-201ENST00000438279 2662 ntBASIC1.11□□□□□ -2.23
ABCA3Q99758 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
ABCA3Q99758 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
ABCA3Q99758 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
ABCA3Q99758 USP9YP33-201ENST00000412220 421 ntBASIC1.11□□□□□ -2.23
ABCA3Q99758 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.11□□□□□ -2.23
ABCA3Q99758 AC098934.3-201ENST00000430450 190 ntBASIC1.11□□□□□ -2.23
ABCA3Q99758 USP9YP35-201ENST00000435696 412 ntBASIC1.11□□□□□ -2.23
ABCA3Q99758 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.11□□□□□ -2.23
ABCA3Q99758 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.11□□□□□ -2.23
ABCA3Q99758 AC023141.11-201ENST00000508864 202 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms