Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC098614.2-201ENST00000426040 255 ntBASIC1.33□□□□□ -2.2
IFT140Q96RY7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.33□□□□□ -2.2
IFT140Q96RY7 RPL7P29-201ENST00000437151 728 ntBASIC1.33□□□□□ -2.2
IFT140Q96RY7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.33□□□□□ -2.2
IFT140Q96RY7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.33□□□□□ -2.2
IFT140Q96RY7 AC010615.3-201ENST00000597319 394 ntBASIC1.33□□□□□ -2.2
IFT140Q96RY7 AC103810.8-201ENST00000607347 118 ntBASIC1.33□□□□□ -2.2
IFT140Q96RY7 AC090116.1-201ENST00000615679 446 ntBASIC1.33□□□□□ -2.2
IFT140Q96RY7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.33□□□□□ -2.2
IFT140Q96RY7 AL356473.1-201ENST00000406203 1408 ntBASIC1.33□□□□□ -2.2
IFT140Q96RY7 RNU6-1197P-201ENST00000391183 107 ntBASIC1.32□□□□□ -2.2
IFT140Q96RY7 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.32□□□□□ -2.2
IFT140Q96RY7 AL714022.1-201ENST00000439897 151 ntBASIC1.32□□□□□ -2.2
IFT140Q96RY7 AC004865.1-201ENST00000442276 1003 ntBASIC1.32□□□□□ -2.2
IFT140Q96RY7 AC079776.3-201ENST00000450665 370 ntBASIC1.32□□□□□ -2.2
IFT140Q96RY7 AC116337.2-201ENST00000477662 156 ntBASIC1.32□□□□□ -2.2
IFT140Q96RY7 RNU2-19P-201ENST00000517288 84 ntBASIC1.32□□□□□ -2.2
IFT140Q96RY7 HMGB1P14-201ENST00000557424 591 ntBASIC1.32□□□□□ -2.2
IFT140Q96RY7 AP002826.1-201ENST00000608835 315 ntBASIC1.32□□□□□ -2.2
IFT140Q96RY7 MIR126-201ENST00000362291 85 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 MIR508-201ENST00000384857 115 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AL356131.1-201ENST00000405826 414 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC244453.4-201ENST00000419150 388 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC246680.2-201ENST00000422106 389 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC244035.1-201ENST00000430042 390 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC004383.1-201ENST00000438135 289 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 FGF7P5-201ENST00000441829 291 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 RPL23AP6-201ENST00000446637 472 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.31□□□□□ -2.2
IFT140Q96RY7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC104806.1-201ENST00000508720 308 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 NIFKP8-201ENST00000560500 874 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 PRR13P7-201ENST00000605538 430 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC135507.1-201ENST00000607214 561 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC110792.4-201ENST00000609843 298 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 MIR2909-201ENST00000617113 69 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.31□□□□□ -2.2
IFT140Q96RY7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
IFT140Q96RY7 SNORA23-201ENST00000365128 182 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.31□□□□□ -2.2
IFT140Q96RY7 AL022238.1-201ENST00000442557 355 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC027575.1-201ENST00000481064 460 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.31□□□□□ -2.2
IFT140Q96RY7 KATNBL1P4-201ENST00000503545 918 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC098862.1-201ENST00000504991 413 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC104108.1-201ENST00000509930 412 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.31□□□□□ -2.2
IFT140Q96RY7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.31□□□□□ -2.2
IFT140Q96RY7 DUXAP11-201ENST00000603858 526 ntBASIC1.31□□□□□ -2.2
IFT140Q96RY7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
IFT140Q96RY7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
IFT140Q96RY7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.3□□□□□ -2.2
IFT140Q96RY7 AC009541.1-201ENST00000438279 2662 ntBASIC1.3□□□□□ -2.2
IFT140Q96RY7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
IFT140Q96RY7 RNU6-942P-201ENST00000363002 107 ntBASIC1.3□□□□□ -2.2
IFT140Q96RY7 AL136372.1-201ENST00000403060 228 ntBASIC1.3□□□□□ -2.2
IFT140Q96RY7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.3□□□□□ -2.2
IFT140Q96RY7 AL589880.1-201ENST00000448271 287 ntBASIC1.3□□□□□ -2.2
IFT140Q96RY7 MTND2P19-201ENST00000449129 1012 ntBASIC1.3□□□□□ -2.2
IFT140Q96RY7 RNU7-23P-201ENST00000459465 62 ntBASIC1.3□□□□□ -2.2
IFT140Q96RY7 KLF3P2-201ENST00000465138 268 ntBASIC1.3□□□□□ -2.2
IFT140Q96RY7 AC107626.1-201ENST00000471084 183 ntBASIC1.3□□□□□ -2.2
IFT140Q96RY7 AC023141.11-201ENST00000508864 202 ntBASIC1.3□□□□□ -2.2
IFT140Q96RY7 AC067942.3-201ENST00000512025 362 ntBASIC1.3□□□□□ -2.2
IFT140Q96RY7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.3□□□□□ -2.2
IFT140Q96RY7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.3□□□□□ -2.2
IFT140Q96RY7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.3□□□□□ -2.2
IFT140Q96RY7 AL031775.1-201ENST00000607014 887 ntBASIC1.3□□□□□ -2.2
IFT140Q96RY7 AC117490.2-201ENST00000610042 594 ntBASIC1.3□□□□□ -2.2
IFT140Q96RY7 RNU6-270P-201ENST00000364131 105 ntBASIC1.29□□□□□ -2.2
IFT140Q96RY7 RNU6-220P-201ENST00000390919 107 ntBASIC1.29□□□□□ -2.2
IFT140Q96RY7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.29□□□□□ -2.2
IFT140Q96RY7 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.29□□□□□ -2.2
IFT140Q96RY7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.29□□□□□ -2.2
IFT140Q96RY7 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.29□□□□□ -2.2
IFT140Q96RY7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.29□□□□□ -2.2
IFT140Q96RY7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.29□□□□□ -2.2
IFT140Q96RY7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.29□□□□□ -2.2
IFT140Q96RY7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.29□□□□□ -2.2
IFT140Q96RY7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.29□□□□□ -2.2
IFT140Q96RY7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.29□□□□□ -2.2
IFT140Q96RY7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.29□□□□□ -2.2
IFT140Q96RY7 AC012669.1-201ENST00000603209 283 ntBASIC1.29□□□□□ -2.2
IFT140Q96RY7 AC021749.1-201ENST00000604322 607 ntBASIC1.29□□□□□ -2.2
IFT140Q96RY7 AC004808.1-201ENST00000627671 721 ntBASIC1.29□□□□□ -2.2
IFT140Q96RY7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
IFT140Q96RY7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
IFT140Q96RY7 RNU6-386P-201ENST00000362650 107 ntBASIC1.28□□□□□ -2.2
IFT140Q96RY7 AL353689.1-201ENST00000438895 199 ntBASIC1.28□□□□□ -2.2
IFT140Q96RY7 RPL31P60-201ENST00000478450 367 ntBASIC1.28□□□□□ -2.2
IFT140Q96RY7 AC021146.2-201ENST00000504736 556 ntBASIC1.28□□□□□ -2.2
IFT140Q96RY7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.28□□□□□ -2.2
IFT140Q96RY7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.28□□□□□ -2.2
IFT140Q96RY7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.28□□□□□ -2.2
IFT140Q96RY7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.28□□□□□ -2.2
IFT140Q96RY7 RRN3P3-201ENST00000549207 578 ntBASIC1.28□□□□□ -2.2
IFT140Q96RY7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.28□□□□□ -2.2
IFT140Q96RY7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.28□□□□□ -2.2
IFT140Q96RY7 MIR4299-201ENST00000577899 72 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms