Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 RNU6-395P-201ENST00000365662 106 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 XGY1-201ENST00000381172 446 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 Y_RNA.474-201ENST00000384341 102 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 RNU6-328P-201ENST00000390887 106 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 RNU2-33P-201ENST00000410344 192 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 RAB9AP3-201ENST00000412737 573 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 SNAP23P1-201ENST00000433229 246 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 AC073063.1-201ENST00000434352 607 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 RAB9AP1-201ENST00000449393 573 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 Y_RNA.635-201ENST00000459041 101 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 RPL7P43-201ENST00000478876 753 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 HMGB1P30-201ENST00000492455 606 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 RPL7P47-201ENST00000497299 556 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 UBE2CP3-201ENST00000502715 450 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 AC008716.1-201ENST00000511084 513 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 RN7SKP83-201ENST00000516512 178 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 RNA5SP454-201ENST00000517231 127 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 AC069113.1-201ENST00000517763 267 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 RNU6-323P-201ENST00000521915 107 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 AC008011.1-201ENST00000545989 227 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 AL157871.3-201ENST00000557231 293 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 MIR4790-201ENST00000577799 79 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 AC023043.2-201ENST00000589678 1026 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 AL050343.2-201ENST00000607338 280 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 AL391261.4-201ENST00000616012 481 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 CR392039.5-201ENST00000623201 510 ntBASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.43□□□□□ -1.86
CTHRC1Q96CG8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 Y_RNA.33-201ENST00000362591 102 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 SNORD116-11-201ENST00000383882 92 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 RNU6-128P-201ENST00000383976 107 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 RNU6-1179P-201ENST00000384667 107 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 PTMAP2-201ENST00000397627 327 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 MIR548K-201ENST00000408406 116 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 PIGFP3-201ENST00000441918 722 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 RPS24P13-201ENST00000442520 397 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 AL136097.1-201ENST00000456945 913 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 Y_RNA.632-201ENST00000459189 102 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 AC009901.1-201ENST00000506703 541 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 Y_RNA.701-201ENST00000516812 110 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 AC087854.1-201ENST00000519706 414 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 IGKV2D-19-201ENST00000523346 262 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 AC138761.3-201ENST00000579993 334 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 MIR4444-1-201ENST00000581696 74 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 MIR4444-2-201ENST00000584390 74 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 MIR5692C1-201ENST00000585309 91 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 KLKP1-201ENST00000595979 403 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 AL160413.1-201ENST00000622780 310 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 RPS4XP5-202ENST00000449995 1334 ntBASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTHRC1Q96CG8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AC007785.2-201ENST00000598627 1916 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 DEFB109C-201ENST00000382575 264 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 DEFB109B-201ENST00000382656 264 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 MIR578-201ENST00000384828 96 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 RPL37P10-201ENST00000412884 288 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 MTCO2P27-201ENST00000420740 428 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AL158156.1-201ENST00000422509 473 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms