Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 RPF2P2-201ENST00000504693 896 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 AC009901.1-201ENST00000506703 541 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01560Q8TB33 MRPS36P2-201ENST00000512569 299 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 RNU6-1129P-201ENST00000515964 104 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 SNORA3.4-201ENST00000515969 96 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 SNORA31.3-201ENST00000516029 96 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 RN7SKP287-201ENST00000516546 266 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 HSPE1P18-201ENST00000517602 280 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.9□□□□□ -2.11
LINC01560Q8TB33 AL359212.1-201ENST00000556608 614 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 MIR3670-2-201ENST00000582974 65 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 MIR3670-1-201ENST00000584160 65 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 MIR3670-3-201ENST00000584855 65 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01560Q8TB33 AL353778.1-201ENST00000603149 408 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 AL161798.1-201ENST00000604630 131 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 MIR3670-4-201ENST00000612260 65 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 AC010378.1-201ENST00000619270 362 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01560Q8TB33 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01560Q8TB33 U2.21-201ENST00000637295 81 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01560Q8TB33 CR848007.1-201ENST00000442354 1699 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 ZNF519P1-201ENST00000449011 1626 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 RNU6-1284P-201ENST00000363701 100 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 U8.8-201ENST00000365399 135 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 RNU1-109P-201ENST00000383960 147 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 NDUFS5P1-201ENST00000405668 289 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 RNU6-193P-201ENST00000410977 107 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 USP9YP13-201ENST00000417797 480 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 RPL36AP6-201ENST00000435770 321 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC118469.1-201ENST00000442943 488 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 RPL26P9-201ENST00000457466 433 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 RPS27AP10-201ENST00000496103 208 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 RPL38P4-201ENST00000502376 214 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC107222.1-201ENST00000510899 637 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 TBCAP3-201ENST00000512475 312 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC022634.1-201ENST00000520765 532 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AP006587.4-201ENST00000526053 529 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 HSPE1P20-201ENST00000538133 289 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 GLYCAM1-201ENST00000546596 285 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 ZNF321P-202ENST00000550843 495 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 ZNF519P3-201ENST00000557158 1032 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC091489.2-201ENST00000566263 604 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC002400.1-201ENST00000569310 726 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 MTATP6P24-201ENST00000576835 677 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 MIR3146-201ENST00000580367 79 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC025811.1-201ENST00000604312 472 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AP000787.2-201ENST00000604432 568 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC090970.3-201ENST00000612566 866 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC008498.1-201ENST00000613012 531 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC034102.8-201ENST00000615146 484 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AP002791.1-201ENST00000623291 381 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01560Q8TB33 AC138915.1-201ENST00000565427 1685 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 MTND5P29-201ENST00000458676 1807 ntBASIC1.89□□□□□ -2.11
LINC01560Q8TB33 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
LINC01560Q8TB33 AL445523.1-201ENST00000451184 1362 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 UBE2L2-201ENST00000254302 429 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 RNU6-512P-201ENST00000364438 103 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 RNY3P13-201ENST00000365542 102 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 RNU6-701P-201ENST00000384059 107 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 RNU6-14P-201ENST00000384630 106 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.88□□□□□ -2.11
LINC01560Q8TB33 RNU2-49P-201ENST00000410666 184 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 RNA5SP492-201ENST00000411330 114 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 RPL17P12-201ENST00000413391 526 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.88□□□□□ -2.11
LINC01560Q8TB33 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01560Q8TB33 ZNF90P2-204ENST00000419323 1075 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 AL353777.1-201ENST00000425552 326 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.88□□□□□ -2.11
LINC01560Q8TB33 RPS15AP5-201ENST00000436276 388 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.88□□□□□ -2.11
LINC01560Q8TB33 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01560Q8TB33 RPS15AP27-201ENST00000449183 343 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01560Q8TB33 AC107626.1-201ENST00000471084 183 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 RPL23AP42-201ENST00000471152 471 ntBASIC1.88□□□□□ -2.11
LINC01560Q8TB33 MTCYBP35-201ENST00000503630 1137 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms