Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MTND5P29-201ENST00000458676 1807 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 RNU6-621P-201ENST00000364752 109 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 U3.13-201ENST00000364804 214 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 RNU6-19P-201ENST00000384718 107 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 NDUFS5P1-201ENST00000405668 289 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 SNORA3.2-201ENST00000408221 125 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 RNA5SP489-201ENST00000410986 109 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AL158823.1-201ENST00000418441 478 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 EIF1AXP1-201ENST00000419267 435 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 MTCO3P45-201ENST00000443036 613 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AC020550.1-201ENST00000447385 163 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 HMGN2P10-201ENST00000448085 265 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AC107953.1-201ENST00000522216 297 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AC023538.1-201ENST00000534576 736 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AC006199.1-201ENST00000548728 219 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AL158163.2-201ENST00000619110 700 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AC123767.1-202ENST00000620407 817 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 AC079416.3-201ENST00000624479 549 ntBASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.86□□□□□ -2.11
CLHC1Q8NHS4 RNU6-432P-201ENST00000384196 109 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 RNU2-2P-201ENST00000410396 191 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 RN7SKP223-201ENST00000410582 62 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AL953862.1-201ENST00000423016 168 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 CYP2C59P-201ENST00000457790 269 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AC005410.1-202ENST00000460347 485 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AC024589.1-201ENST00000512207 263 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AC008549.1-201ENST00000512900 643 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AC021451.1-201ENST00000523498 1129 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AP005639.2-201ENST00000527592 928 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 VN1R83P-201ENST00000595685 445 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AL031274.2-201ENST00000599419 203 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AC112220.2-201ENST00000605513 533 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 U2.15-201ENST00000611544 191 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 U2.16-201ENST00000613119 191 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AC107075.1-201ENST00000613695 314 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 U2.12-201ENST00000613778 191 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 U2.20-201ENST00000613956 192 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AL773524.1-201ENST00000614065 229 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 U2.9-201ENST00000615427 191 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 U2.11-201ENST00000616345 191 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 U2.2-201ENST00000616535 191 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 U2.3-201ENST00000617785 191 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 U2.19-201ENST00000618602 191 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 RNU2-1-201ENST00000618664 191 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 U2.6-201ENST00000619225 191 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 U2.5-201ENST00000619465 191 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 U2.10-201ENST00000620268 191 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 YWHAEP7-203ENST00000622054 312 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 DUXAP9-208ENST00000622815 614 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AC104985.3-201ENST00000623479 597 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AC099063.3-201ENST00000642066 185 ntBASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLHC1Q8NHS4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 RNU6-744P-201ENST00000365557 107 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 RNU6-1316P-201ENST00000384242 108 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 USP9YP11-201ENST00000427537 717 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AL445646.1-201ENST00000431784 216 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 GTF2IP3-201ENST00000433887 494 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 FAM103A2P-201ENST00000444122 354 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AP001324.2-201ENST00000461163 319 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AC106872.3-201ENST00000495104 446 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AC093752.1-206ENST00000511823 336 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 MTND5P13-201ENST00000513046 1079 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms