Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 ZNF849P-201ENST00000594711 1566 ntBASIC0.4□□□□□ -2.34
SYNE1Q8NF91 MTND4P21-201ENST00000453886 1357 ntBASIC0.4□□□□□ -2.34
SYNE1Q8NF91 RNU6-359P-201ENST00000365466 108 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 RNU6-932P-201ENST00000391108 106 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 RNU2-63P-201ENST00000410792 194 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 TPTE2P1-204ENST00000435256 593 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC092170.1-201ENST00000440211 356 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 DPPA3P1-201ENST00000448050 469 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC092902.1-201ENST00000486999 259 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 BNIP3P24-201ENST00000593398 557 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AL450336.1-201ENST00000605180 586 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC055876.5-201ENST00000605667 259 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 MIR7974-201ENST00000615835 79 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AL049641.1-201ENST00000441055 1948 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AL161449.1-201ENST00000414531 1199 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC005410.1-202ENST00000460347 485 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AL138963.2-201ENST00000605137 226 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 OR6C66P-201ENST00000414917 930 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AL596276.1-201ENST00000434465 418 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 RNU6-760P-201ENST00000516078 97 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AP004607.1-201ENST00000524456 203 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC092451.2-201ENST00000538746 658 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC130650.2-201ENST00000618736 2403 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 MIR222-201ENST00000384992 110 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 MIR17-201ENST00000385012 84 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 BMI1P1-201ENST00000445879 941 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 CABYRP1-201ENST00000465493 1045 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 HSPA8P13-201ENST00000523715 472 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AL020997.3-201ENST00000602843 359 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC069294.1-201ENST00000608397 350 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AL022578.1-201ENST00000439330 1433 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC025263.3-201ENST00000622965 1396 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 SNORA38-201ENST00000363946 132 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 RNU1-148P-201ENST00000384472 162 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 MIR150-201ENST00000385048 84 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 TAF9BP2-201ENST00000400856 499 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 ZFAND6P1-201ENST00000434138 605 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 SUMO2P2-201ENST00000456482 255 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 RPL32P14-201ENST00000463196 378 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC147055.4-201ENST00000504399 745 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 EIF1AXP2-201ENST00000555940 413 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC025588.3-201ENST00000604182 274 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AL627230.6-201ENST00000611129 280 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 RPS24P7-201ENST00000416921 246 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 TAAR7P-201ENST00000436141 242 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 MTND2P21-201ENST00000436242 1042 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC048346.1-201ENST00000510247 144 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AF131216.2-201ENST00000512316 564 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC090616.3-201ENST00000582184 217 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 UBE2L4-201ENST00000587688 464 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 SNORD14A-201ENST00000606526 91 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AL163051.2-201ENST00000618976 735 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 AC068057.2-201ENST00000624047 895 ntBASIC0.4□□□□□ -2.35
SYNE1Q8NF91 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 MTND4P24-201ENST00000424002 397 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC004865.1-201ENST00000442276 1003 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 MRPS17P3-201ENST00000465453 385 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 MED28P6-201ENST00000558776 231 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 RNA5SP363-201ENST00000365072 115 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 RNU6-152P-201ENST00000384037 107 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AL133264.1-201ENST00000407157 562 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 Z85995.1-201ENST00000415547 335 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 ARL2BPP3-201ENST00000421226 480 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 MTND5P25-201ENST00000430499 799 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC092573.2-201ENST00000434546 243 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC092427.1-201ENST00000439177 601 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms