Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 Z82210.1-201ENST00000440037 231 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.5□□□□□ -1.85
USP38Q8NB14 BNIP3P2-201ENST00000441221 577 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 DDX3P2-201ENST00000446138 111 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 AC006512.1-201ENST00000468816 291 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.5□□□□□ -1.85
USP38Q8NB14 AC092185.1-201ENST00000491371 97 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 RPL9P6-201ENST00000492764 598 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 AC091133.4-201ENST00000511142 308 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 Y_RNA.689-201ENST00000516589 107 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 RNU6-928P-201ENST00000516876 104 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 RNU6-711P-201ENST00000517255 106 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 AC009812.2-201ENST00000517657 457 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 AP001646.1-201ENST00000527936 915 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.5□□□□□ -1.85
USP38Q8NB14 OR5B19P-201ENST00000531766 928 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.5□□□□□ -1.85
USP38Q8NB14 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.5□□□□□ -1.85
USP38Q8NB14 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.5□□□□□ -1.85
USP38Q8NB14 AC098826.3-201ENST00000603823 466 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
USP38Q8NB14 AC009161.2-201ENST00000624626 138 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 AC099654.12-201ENST00000639868 649 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.5□□□□□ -1.85
USP38Q8NB14 FAM35CP-201ENST00000554755 2470 ntBASIC3.5□□□□□ -1.85
USP38Q8NB14 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
USP38Q8NB14 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.49□□□□□ -1.85
USP38Q8NB14 RNU6-179P-201ENST00000363350 107 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 SNORA62.1-201ENST00000364287 154 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 Y_RNA.367-201ENST00000365544 101 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 SNORA24.1-201ENST00000384401 135 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 MIR887-201ENST00000401258 79 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 RNA5SP508-201ENST00000411327 119 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USP38Q8NB14 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.49□□□□□ -1.85
USP38Q8NB14 AL139281.1-201ENST00000422120 335 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USP38Q8NB14 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.49□□□□□ -1.85
USP38Q8NB14 SRIP2-201ENST00000428470 166 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 AL591212.2-201ENST00000433923 257 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 MTND1P1-201ENST00000445453 368 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 Z99127.3-201ENST00000448158 395 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 AC126389.1-201ENST00000477436 290 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 AL135752.1-201ENST00000479477 471 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 RNA5SP217-201ENST00000515959 91 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 RNU6-720P-201ENST00000516363 108 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 Y_RNA.676-201ENST00000516393 96 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 AC245166.1-201ENST00000521012 253 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.49□□□□□ -1.85
USP38Q8NB14 OR5AL2P-201ENST00000532185 920 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
USP38Q8NB14 HMGB1P6-201ENST00000569046 646 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 AL365204.3-201ENST00000612448 685 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
USP38Q8NB14 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.49□□□□□ -1.85
USP38Q8NB14 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.49□□□□□ -1.85
USP38Q8NB14 U6.114-201ENST00000636407 96 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 AC093010.3-201ENST00000570269 15214 ntBASIC3.49□□□□□ -1.85
USP38Q8NB14 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
USP38Q8NB14 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP38Q8NB14 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP38Q8NB14 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP38Q8NB14 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP38Q8NB14 Y_RNA.409-201ENST00000383990 98 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 RNU6-1215P-201ENST00000384441 102 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 AL139397.2-201ENST00000404529 772 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
USP38Q8NB14 RNA5SP38-201ENST00000410750 119 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.48□□□□□ -1.85
USP38Q8NB14 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
USP38Q8NB14 MTATP6P18-201ENST00000417994 673 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 RPL7P46-201ENST00000425129 740 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 MYL8P-204ENST00000431574 518 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 CST9LP2-201ENST00000437612 320 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.48□□□□□ -1.85
USP38Q8NB14 EEF1B2P7-201ENST00000451177 676 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 AC022364.2-201ENST00000457963 554 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 AC087588.1-201ENST00000462203 316 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 RPS29P26-201ENST00000477483 171 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 HMGB1P29-201ENST00000505659 499 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 SNORA31.3-201ENST00000516029 96 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 RNU6-314P-201ENST00000516574 104 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 RNU6-143P-201ENST00000516942 93 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.48□□□□□ -1.85
USP38Q8NB14 MTCYBP20-201ENST00000524239 1129 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.48□□□□□ -1.85
USP38Q8NB14 AC010546.1-201ENST00000569391 485 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 AC146944.4-201ENST00000602697 718 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 AC025449.1-201ENST00000603896 529 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 HSPE1P7-201ENST00000604681 321 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 AC099506.2-201ENST00000623074 221 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 AC025034.2-201ENST00000623264 286 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 AC093648.1-201ENST00000623546 606 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
USP38Q8NB14 MTND5P42-201ENST00000637720 498 ntBASIC3.48□□□□□ -1.85
USP38Q8NB14 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.48□□□□□ -1.85
USP38Q8NB14 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms