Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS8Q8N3P4 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS8Q8N3P4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS8Q8N3P4 AP000254.1-201ENST00000609934 520 ntBASIC1.16□□□□□ -2.22
VPS8Q8N3P4 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.16□□□□□ -2.22
VPS8Q8N3P4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
VPS8Q8N3P4 RNU6-1226P-201ENST00000384317 107 ntBASIC1.15□□□□□ -2.22
VPS8Q8N3P4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.15□□□□□ -2.22
VPS8Q8N3P4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.15□□□□□ -2.22
VPS8Q8N3P4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.15□□□□□ -2.22
VPS8Q8N3P4 LTV1P1-201ENST00000510683 1237 ntBASIC1.15□□□□□ -2.22
VPS8Q8N3P4 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.15□□□□□ -2.22
VPS8Q8N3P4 SUB1P4-201ENST00000566062 339 ntBASIC1.15□□□□□ -2.22
VPS8Q8N3P4 AC074051.3-201ENST00000570238 358 ntBASIC1.15□□□□□ -2.22
VPS8Q8N3P4 U4atac.1-201ENST00000618345 95 ntBASIC1.15□□□□□ -2.22
VPS8Q8N3P4 MTND4P8-201ENST00000514997 1362 ntBASIC1.15□□□□□ -2.22
VPS8Q8N3P4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
VPS8Q8N3P4 RNU6-1155P-201ENST00000363554 107 ntBASIC1.15□□□□□ -2.23
VPS8Q8N3P4 SNORA8-201ENST00000384574 139 ntBASIC1.15□□□□□ -2.23
VPS8Q8N3P4 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.15□□□□□ -2.23
VPS8Q8N3P4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS8Q8N3P4 AL049714.1-201ENST00000466686 347 ntBASIC1.15□□□□□ -2.23
VPS8Q8N3P4 AC011712.1-201ENST00000588959 234 ntBASIC1.15□□□□□ -2.23
VPS8Q8N3P4 AL078605.1-201ENST00000603529 500 ntBASIC1.15□□□□□ -2.23
VPS8Q8N3P4 AC008443.7-201ENST00000622195 246 ntBASIC1.15□□□□□ -2.23
VPS8Q8N3P4 Y_RNA.36-201ENST00000362602 112 ntBASIC1.14□□□□□ -2.23
VPS8Q8N3P4 RNU6-1083P-201ENST00000384022 107 ntBASIC1.14□□□□□ -2.23
VPS8Q8N3P4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.14□□□□□ -2.23
VPS8Q8N3P4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS8Q8N3P4 MICF-203ENST00000432679 129 ntBASIC1.14□□□□□ -2.23
VPS8Q8N3P4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.14□□□□□ -2.23
VPS8Q8N3P4 AC103851.1-201ENST00000506833 274 ntBASIC1.14□□□□□ -2.23
VPS8Q8N3P4 RNU6-362P-201ENST00000516736 90 ntBASIC1.14□□□□□ -2.23
VPS8Q8N3P4 RNU6-798P-201ENST00000516912 103 ntBASIC1.14□□□□□ -2.23
VPS8Q8N3P4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS8Q8N3P4 AC104997.1-201ENST00000519761 717 ntBASIC1.14□□□□□ -2.23
VPS8Q8N3P4 MIR98-201ENST00000606724 119 ntBASIC1.14□□□□□ -2.23
VPS8Q8N3P4 AC069294.1-201ENST00000608397 350 ntBASIC1.14□□□□□ -2.23
VPS8Q8N3P4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
VPS8Q8N3P4 AC090116.1-201ENST00000615679 446 ntBASIC1.14□□□□□ -2.23
VPS8Q8N3P4 OR5H6-203ENST00000642105 978 ntBASIC1.14□□□□□ -2.23
VPS8Q8N3P4 SNORA22-201ENST00000383907 134 ntBASIC1.13□□□□□ -2.23
VPS8Q8N3P4 SNORA22C-201ENST00000384614 134 ntBASIC1.13□□□□□ -2.23
VPS8Q8N3P4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.13□□□□□ -2.23
VPS8Q8N3P4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS8Q8N3P4 AC023141.4-201ENST00000412031 328 ntBASIC1.13□□□□□ -2.23
VPS8Q8N3P4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS8Q8N3P4 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.13□□□□□ -2.23
VPS8Q8N3P4 RFC5P1-201ENST00000454419 874 ntBASIC1.13□□□□□ -2.23
VPS8Q8N3P4 AC114801.2-201ENST00000503825 781 ntBASIC1.13□□□□□ -2.23
VPS8Q8N3P4 AC107953.1-201ENST00000522216 297 ntBASIC1.13□□□□□ -2.23
VPS8Q8N3P4 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.13□□□□□ -2.23
VPS8Q8N3P4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS8Q8N3P4 AC023825.1-201ENST00000566704 1030 ntBASIC1.13□□□□□ -2.23
VPS8Q8N3P4 AC013244.2-201ENST00000603396 103 ntBASIC1.13□□□□□ -2.23
VPS8Q8N3P4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VPS8Q8N3P4 RNU6-272P-201ENST00000411028 104 ntBASIC1.12□□□□□ -2.23
VPS8Q8N3P4 AC079448.1-201ENST00000449377 373 ntBASIC1.12□□□□□ -2.23
VPS8Q8N3P4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.12□□□□□ -2.23
VPS8Q8N3P4 AL391646.1-201ENST00000603860 190 ntBASIC1.12□□□□□ -2.23
VPS8Q8N3P4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.12□□□□□ -2.23
VPS8Q8N3P4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.12□□□□□ -2.23
VPS8Q8N3P4 AC092192.1-201ENST00000633154 1018 ntBASIC1.12□□□□□ -2.23
VPS8Q8N3P4 AC087821.2-201ENST00000637086 450 ntBASIC1.12□□□□□ -2.23
VPS8Q8N3P4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
VPS8Q8N3P4 CBX3P6-201ENST00000430257 527 ntBASIC1.11□□□□□ -2.23
VPS8Q8N3P4 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.11□□□□□ -2.23
VPS8Q8N3P4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS8Q8N3P4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
VPS8Q8N3P4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS8Q8N3P4 RNA5SP137-201ENST00000516833 135 ntBASIC1.11□□□□□ -2.23
VPS8Q8N3P4 AC012669.1-201ENST00000603209 283 ntBASIC1.11□□□□□ -2.23
VPS8Q8N3P4 DUSP12P1-201ENST00000612874 516 ntBASIC1.11□□□□□ -2.23
VPS8Q8N3P4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
VPS8Q8N3P4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
VPS8Q8N3P4 AC009541.1-201ENST00000438279 2662 ntBASIC1.1□□□□□ -2.23
VPS8Q8N3P4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS8Q8N3P4 AC097499.1-201ENST00000444277 208 ntBASIC1.1□□□□□ -2.23
VPS8Q8N3P4 RNU6-1132P-201ENST00000459214 107 ntBASIC1.1□□□□□ -2.23
VPS8Q8N3P4 RNA5SP57-201ENST00000459463 123 ntBASIC1.1□□□□□ -2.23
VPS8Q8N3P4 AC021382.1-201ENST00000483523 359 ntBASIC1.1□□□□□ -2.23
VPS8Q8N3P4 AC139453.3-201ENST00000493276 369 ntBASIC1.1□□□□□ -2.23
VPS8Q8N3P4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS8Q8N3P4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS8Q8N3P4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS8Q8N3P4 AF213884.2-201ENST00000510417 903 ntBASIC1.1□□□□□ -2.23
VPS8Q8N3P4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.1□□□□□ -2.23
VPS8Q8N3P4 RNU4-18P-201ENST00000516751 149 ntBASIC1.1□□□□□ -2.23
VPS8Q8N3P4 RNA5SP165-201ENST00000517142 115 ntBASIC1.1□□□□□ -2.23
VPS8Q8N3P4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS8Q8N3P4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS8Q8N3P4 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS8Q8N3P4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.1□□□□□ -2.23
VPS8Q8N3P4 AC103810.8-201ENST00000607347 118 ntBASIC1.1□□□□□ -2.23
VPS8Q8N3P4 AL136313.1-201ENST00000624804 202 ntBASIC1.1□□□□□ -2.23
VPS8Q8N3P4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS8Q8N3P4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VPS8Q8N3P4 MIR1303-201ENST00000408625 86 ntBASIC1.09□□□□□ -2.23
VPS8Q8N3P4 TPMTP3-201ENST00000411928 735 ntBASIC1.09□□□□□ -2.23
VPS8Q8N3P4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms