Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KRT78Q8N1N4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.65□□□□□ -1.82
KRT78Q8N1N4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.65□□□□□ -1.82
KRT78Q8N1N4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 RNU6-45P-201ENST00000384471 107 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 RNA5SP118-201ENST00000410385 109 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 MTND2P23-201ENST00000422990 651 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 TOMM20P4-201ENST00000427861 435 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 MTND3P16-201ENST00000452205 344 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 AC128713.1-201ENST00000471495 306 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 HMGB1P30-201ENST00000492455 606 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 AL035413.2-201ENST00000604801 525 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 AC005344.1-201ENST00000613391 459 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 MIR8058-201ENST00000615737 89 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 AL354798.1-201ENST00000622505 329 ntBASIC3.65□□□□□ -1.83
KRT78Q8N1N4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.65□□□□□ -1.83
KRT78Q8N1N4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 MTND5P7-201ENST00000413558 1798 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 RNU4-79P-201ENST00000362764 141 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 RNU6-270P-201ENST00000364131 105 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 Y_RNA.231-201ENST00000364358 102 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 RNU6-1127P-201ENST00000384580 107 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 RNU6-658P-201ENST00000384606 106 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 HMGN2P8-201ENST00000391458 268 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 AL513185.2-201ENST00000425543 193 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 AC091390.1-201ENST00000433904 331 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 NUTF2P7-201ENST00000453086 375 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 AC010099.1-201ENST00000455434 375 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 RAC1P2-201ENST00000511164 579 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 RNU1-103P-201ENST00000516502 125 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 RNA5SP143-201ENST00000516936 115 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 AC025755.1-201ENST00000521306 278 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 AC093027.1-201ENST00000546698 429 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 MIR5583-1-201ENST00000580941 59 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 AL360085.1-201ENST00000604713 532 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 MIR6810-201ENST00000622701 70 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 FP236240.3-201ENST00000623061 327 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 AP004289.2-201ENST00000444413 1457 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 AC007656.2-201ENST00000624902 4547 ntBASIC3.64□□□□□ -1.83
KRT78Q8N1N4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRT78Q8N1N4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.63□□□□□ -1.83
KRT78Q8N1N4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
KRT78Q8N1N4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRT78Q8N1N4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.63□□□□□ -1.83
KRT78Q8N1N4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRT78Q8N1N4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRT78Q8N1N4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRT78Q8N1N4 Y_RNA.419-201ENST00000384041 102 ntBASIC3.63□□□□□ -1.83
KRT78Q8N1N4 RNU6-198P-201ENST00000384258 104 ntBASIC3.63□□□□□ -1.83
KRT78Q8N1N4 MIR578-201ENST00000384828 96 ntBASIC3.63□□□□□ -1.83
KRT78Q8N1N4 RNA5SP424-201ENST00000390988 115 ntBASIC3.63□□□□□ -1.83
KRT78Q8N1N4 RPS4XP7-201ENST00000406274 780 ntBASIC3.63□□□□□ -1.83
KRT78Q8N1N4 RNU4-26P-201ENST00000410270 107 ntBASIC3.63□□□□□ -1.83
KRT78Q8N1N4 RPL26P27-201ENST00000414397 437 ntBASIC3.63□□□□□ -1.83
KRT78Q8N1N4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.63□□□□□ -1.83
KRT78Q8N1N4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.63□□□□□ -1.83
KRT78Q8N1N4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.63□□□□□ -1.83
KRT78Q8N1N4 AL353729.1-201ENST00000425044 720 ntBASIC3.63□□□□□ -1.83
KRT78Q8N1N4 RPL7P2-201ENST00000427639 268 ntBASIC3.63□□□□□ -1.83
KRT78Q8N1N4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.63□□□□□ -1.83
KRT78Q8N1N4 ERLEC1P1-201ENST00000433806 578 ntBASIC3.63□□□□□ -1.83
KRT78Q8N1N4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.63□□□□□ -1.83
KRT78Q8N1N4 RPS15AP27-201ENST00000449183 343 ntBASIC3.63□□□□□ -1.83
KRT78Q8N1N4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.63□□□□□ -1.83
KRT78Q8N1N4 AL031183.1-201ENST00000457667 207 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms