Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 FO393413.1-201ENST00000402892 195 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC090960.1-201ENST00000421072 306 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC007560.1-201ENST00000426912 237 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 MED13P1-201ENST00000428342 171 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC073614.1-201ENST00000438690 650 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 MTND1P27-201ENST00000451117 902 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 RAP1BP2-201ENST00000478270 544 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 RPL23AP70-201ENST00000483361 460 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC026801.1-201ENST00000497178 464 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC108078.2-201ENST00000510750 236 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 RNU6-1315P-201ENST00000517187 99 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AP003122.3-201ENST00000526316 255 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 COX6CP5-201ENST00000527162 228 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC084851.1-201ENST00000529105 249 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 ADI1P3-201ENST00000549509 470 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC087883.1-201ENST00000551882 391 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC012414.6-201ENST00000568241 401 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 MIR4513-201ENST00000581077 86 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 AC019159.1-201ENST00000605094 187 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 MIR7515-201ENST00000637837 67 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 FARSBP1-201ENST00000435808 1778 ntBASIC3.01□□□□□ -1.93
PRPF39Q86UA1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRPF39Q86UA1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
PRPF39Q86UA1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PRPF39Q86UA1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3□□□□□ -1.93
PRPF39Q86UA1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3□□□□□ -1.93
PRPF39Q86UA1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PRPF39Q86UA1 RNU6-851P-201ENST00000384565 107 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 MIR558-201ENST00000384920 94 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 AL356057.2-201ENST00000403318 432 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 RN7SKP142-201ENST00000411236 328 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 USP9YP6-201ENST00000413550 854 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 AL109913.1-201ENST00000421173 514 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3□□□□□ -1.93
PRPF39Q86UA1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3□□□□□ -1.93
PRPF39Q86UA1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3□□□□□ -1.93
PRPF39Q86UA1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3□□□□□ -1.93
PRPF39Q86UA1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3□□□□□ -1.93
PRPF39Q86UA1 AC098591.2-201ENST00000510152 315 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 RNU6-572P-201ENST00000516724 80 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 SNORA18.6-201ENST00000516792 115 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 RNU6-703P-201ENST00000516946 107 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
PRPF39Q86UA1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3□□□□□ -1.93
PRPF39Q86UA1 AC025755.1-201ENST00000521306 278 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 MTND2P38-201ENST00000522536 667 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 ZDHHC20P3-201ENST00000531576 336 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 OR5B19P-201ENST00000531766 928 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 AL121821.2-201ENST00000556081 394 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 AC021739.1-201ENST00000559631 174 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3□□□□□ -1.93
PRPF39Q86UA1 NRBF2P1-201ENST00000587407 859 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 AC015871.2-201ENST00000603605 948 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 MIR15A-201ENST00000607334 83 ntBASIC3□□□□□ -1.93
PRPF39Q86UA1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3□□□□□ -1.93
PRPF39Q86UA1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
PRPF39Q86UA1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3□□□□□ -1.93
PRPF39Q86UA1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 SNORA4.3-201ENST00000365564 137 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 Y_RNA.534-201ENST00000384599 112 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 MIR627-201ENST00000384979 97 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 RNU6-1025P-201ENST00000410629 104 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AL451074.5-201ENST00000415894 435 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AC114491.1-201ENST00000416095 246 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AL591704.1-201ENST00000432574 275 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AL022238.1-201ENST00000442557 355 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 BRK1P2-201ENST00000442875 223 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 OSTCP8-201ENST00000445117 448 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 HMGN2P10-201ENST00000448085 265 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 GAPDHP17-201ENST00000449858 1001 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms