Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RNU6-28P-201ENST00000362378 107 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 Y_RNA.148-201ENST00000363557 117 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 Y_RNA.188-201ENST00000363952 111 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 RNU4-20P-201ENST00000365601 151 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 SNORA9-201ENST00000384215 133 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 MIR607-201ENST00000385241 96 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 AL356421.1-201ENST00000403255 413 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 RNU6-985P-201ENST00000410182 104 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 RNU2-9P-201ENST00000410194 145 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 Y_RNA.615-201ENST00000410769 117 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 Y_RNA.618-201ENST00000410949 107 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 HMGB3P2-201ENST00000411913 584 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 RPS15AP40-201ENST00000419621 391 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 MTCO2P27-201ENST00000420740 428 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 AC006548.1-201ENST00000427470 102 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 RPL23AP82-202ENST00000427528 469 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 PSMA2P3-201ENST00000429685 675 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.19□□□□□ -1.9
USP43Q70EL4 RPL23AP30-201ENST00000432419 501 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 RPL21P112-201ENST00000434403 463 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP43Q70EL4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.19□□□□□ -1.9
USP43Q70EL4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.19□□□□□ -1.9
USP43Q70EL4 AL356010.1-201ENST00000456364 102 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 MTATP8P1-201ENST00000467115 207 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 VN1R17P-201ENST00000472048 1090 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 AL136126.1-201ENST00000473603 402 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 AC012181.1-201ENST00000479895 423 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 RPS4XP13-201ENST00000483219 789 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 EIF4EP3-201ENST00000498782 656 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 RPL38P4-201ENST00000502376 214 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.19□□□□□ -1.9
USP43Q70EL4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.19□□□□□ -1.9
USP43Q70EL4 HMGN1P11-201ENST00000508668 303 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.19□□□□□ -1.9
USP43Q70EL4 AC093853.1-201ENST00000515689 483 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 RNU6-559P-201ENST00000516151 98 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 AC022695.1-201ENST00000522089 237 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.19□□□□□ -1.9
USP43Q70EL4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.19□□□□□ -1.9
USP43Q70EL4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.19□□□□□ -1.9
USP43Q70EL4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.19□□□□□ -1.9
USP43Q70EL4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.19□□□□□ -1.9
USP43Q70EL4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.19□□□□□ -1.9
USP43Q70EL4 AC005668.1-201ENST00000571142 476 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.19□□□□□ -1.9
USP43Q70EL4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.19□□□□□ -1.9
USP43Q70EL4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.19□□□□□ -1.9
USP43Q70EL4 AC091953.5-201ENST00000622919 233 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 CR381572.1-201ENST00000625098 102 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.19□□□□□ -1.9
USP43Q70EL4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP43Q70EL4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.19□□□□□ -1.9
USP43Q70EL4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP43Q70EL4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.18□□□□□ -1.9
USP43Q70EL4 AC073346.2-201ENST00000624724 2058 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP43Q70EL4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
USP43Q70EL4 OR1S2-201ENST00000302592 978 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 Y_RNA.47-201ENST00000362697 108 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 Y_RNA.112-201ENST00000363250 102 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 RNU6-379P-201ENST00000363813 104 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 SNORA7.2-201ENST00000364446 145 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 U3.11-201ENST00000364476 212 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 RNY4P16-201ENST00000364768 94 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 RNU6-26P-201ENST00000383985 107 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 RNU6-1226P-201ENST00000384317 107 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 RNU6-1297P-201ENST00000384415 104 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 MIR1-2-201ENST00000384961 85 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
USP43Q70EL4 RNU6-1106P-201ENST00000390845 107 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 RNU6-847P-201ENST00000411115 108 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.18□□□□□ -1.9
USP43Q70EL4 DUTP6-201ENST00000425573 462 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 AC091286.1-201ENST00000431233 461 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 AC119618.1-201ENST00000434191 222 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.18□□□□□ -1.9
USP43Q70EL4 BNIP3P2-201ENST00000441221 577 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 AC010655.1-201ENST00000449336 292 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 RPS24P6-201ENST00000452670 400 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.18□□□□□ -1.9
USP43Q70EL4 RPL23AP67-201ENST00000465341 474 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 RPL23AP41-201ENST00000484754 458 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 AC006483.1-201ENST00000487308 313 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 AC055855.1-201ENST00000489563 579 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.18□□□□□ -1.9
USP43Q70EL4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP43Q70EL4 TMEM248P1-201ENST00000510579 951 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 AC104057.1-201ENST00000515547 497 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 SCARNA24.1-201ENST00000516465 137 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 RNU6-1271P-201ENST00000517049 105 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 SNORA70.24-201ENST00000517233 118 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.18□□□□□ -1.9
USP43Q70EL4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.18□□□□□ -1.9
USP43Q70EL4 IGKV2D-19-201ENST00000523346 262 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.18□□□□□ -1.9
USP43Q70EL4 APOOP3-201ENST00000536787 586 ntBASIC3.18□□□□□ -1.9
USP43Q70EL4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms