Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL606490.4-201ENST00000423117 127 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 AC097499.1-201ENST00000444277 208 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS13CQ709C8 Y_RNA.644-201ENST00000459006 113 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 AC093770.1-201ENST00000511559 571 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS13CQ709C8 AC006518.2-201ENST00000542513 940 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 AC243960.4-201ENST00000600532 288 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 AL627230.6-201ENST00000611129 280 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 AC013470.4-201ENST00000619978 986 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
VPS13CQ709C8 MIR10B-201ENST00000385011 110 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 AP002784.2-201ENST00000397300 549 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS13CQ709C8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS13CQ709C8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS13CQ709C8 CLIC4P2-201ENST00000601934 717 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 MIR198-201ENST00000637333 62 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 CCT4P2-201ENST00000233836 1548 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 RNU6-112P-201ENST00000363599 104 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
VPS13CQ709C8 AL591034.1-201ENST00000407447 340 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 AL133384.1-201ENST00000412744 351 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS13CQ709C8 MTATP6P4-201ENST00000427725 675 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 AC245047.4-201ENST00000433189 144 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.26□□□□□ -2.37
VPS13CQ709C8 CYCTP-201ENST00000504253 315 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 FAM60CP-201ENST00000591086 664 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 AL136363.1-201ENST00000605349 337 ntBASIC0.26□□□□□ -2.37
VPS13CQ709C8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
VPS13CQ709C8 SNORA38-201ENST00000363946 132 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 SNORA8-201ENST00000384574 139 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 MIR676-201ENST00000390702 67 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.25□□□□□ -2.37
VPS13CQ709C8 MTND5P8-201ENST00000449817 1083 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 RPL30P14-201ENST00000482744 348 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 AC090666.1-201ENST00000578241 445 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 Y_RNA.25-201ENST00000362528 102 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 RNA5SP361-201ENST00000362686 118 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 RNU6-45P-201ENST00000384471 107 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 AL512604.1-201ENST00000404812 257 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 NDUFB4P7-201ENST00000423198 363 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.25□□□□□ -2.37
VPS13CQ709C8 AC084824.5-201ENST00000612009 413 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 uc_338.9-201ENST00000617424 182 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 RN7SKP142-201ENST00000411236 328 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 SNORA14.1-201ENST00000516113 141 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.25□□□□□ -2.37
VPS13CQ709C8 MIR4493-201ENST00000584016 73 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 AL390240.1-201ENST00000612950 384 ntBASIC0.25□□□□□ -2.37
VPS13CQ709C8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.25□□□□□ -2.37
VPS13CQ709C8 RNU6-452P-201ENST00000384406 107 ntBASIC0.24□□□□□ -2.37
VPS13CQ709C8 MIR1207-201ENST00000408249 87 ntBASIC0.24□□□□□ -2.37
VPS13CQ709C8 AC097463.2-201ENST00000421074 142 ntBASIC0.24□□□□□ -2.37
VPS13CQ709C8 ARL2BPP3-201ENST00000421226 480 ntBASIC0.24□□□□□ -2.37
VPS13CQ709C8 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.24□□□□□ -2.37
VPS13CQ709C8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.24□□□□□ -2.37
VPS13CQ709C8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.24□□□□□ -2.37
VPS13CQ709C8 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.24□□□□□ -2.37
VPS13CQ709C8 AL021879.1-201ENST00000611756 288 ntBASIC0.24□□□□□ -2.37
VPS13CQ709C8 MIR101-1-201ENST00000362265 75 ntBASIC0.24□□□□□ -2.37
VPS13CQ709C8 SNORD118-201ENST00000363593 134 ntBASIC0.24□□□□□ -2.37
VPS13CQ709C8 RNU1-36P-201ENST00000365130 165 ntBASIC0.24□□□□□ -2.37
VPS13CQ709C8 ERHP1-201ENST00000523006 310 ntBASIC0.24□□□□□ -2.37
VPS13CQ709C8 MIR126-201ENST00000362291 85 ntBASIC0.24□□□□□ -2.37
VPS13CQ709C8 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
VPS13CQ709C8 AL109918.3-201ENST00000603072 338 ntBASIC0.24□□□□□ -2.37
VPS13CQ709C8 PRR13P7-201ENST00000605538 430 ntBASIC0.24□□□□□ -2.37
VPS13CQ709C8 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.24□□□□□ -2.37
VPS13CQ709C8 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.24□□□□□ -2.37
VPS13CQ709C8 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.23□□□□□ -2.37
VPS13CQ709C8 TMEM167AP1-201ENST00000423409 219 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 AL353689.1-201ENST00000438895 199 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.23□□□□□ -2.37
VPS13CQ709C8 RNU6-322P-201ENST00000516010 103 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 AC068714.1-201ENST00000559623 800 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
VPS13CQ709C8 BTF3L4P2-201ENST00000392798 346 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 AC010099.3-201ENST00000423896 409 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 AC136628.3-201ENST00000521868 290 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.23□□□□□ -2.37
VPS13CQ709C8 AL669831.4-202ENST00000590817 238 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 VN1R81P-201ENST00000602085 372 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 AC009220.3-201ENST00000604318 586 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 Y_RNA.185-201ENST00000363894 100 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 AC119618.1-201ENST00000434191 222 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 OSTCP8-201ENST00000445117 448 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 AC055731.1-201ENST00000474387 401 ntBASIC0.23□□□□□ -2.37
VPS13CQ709C8 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.23□□□□□ -2.37
VPS13CQ709C8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.22□□□□□ -2.37
VPS13CQ709C8 AC239798.3-201ENST00000454459 408 ntBASIC0.22□□□□□ -2.37
VPS13CQ709C8 RNA5SP57-201ENST00000459463 123 ntBASIC0.22□□□□□ -2.37
VPS13CQ709C8 OR2A41P-201ENST00000473586 105 ntBASIC0.22□□□□□ -2.37
VPS13CQ709C8 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.22□□□□□ -2.37
VPS13CQ709C8 MIR627-201ENST00000384979 97 ntBASIC0.22□□□□□ -2.37
VPS13CQ709C8 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.22□□□□□ -2.37
VPS13CQ709C8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms