Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 ATP5JP1-201ENST00000431631 322 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AL159987.2-201ENST00000432754 307 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 RNU7-182P-201ENST00000459009 62 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC004801.2-202ENST00000463559 283 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 RN7SL594P-201ENST00000470590 287 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC025518.1-201ENST00000479856 347 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC091951.2-201ENST00000500762 203 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 MTCO2P30-201ENST00000503662 364 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC114786.4-201ENST00000508771 728 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC046134.1-201ENST00000514454 666 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 SNORD60.2-201ENST00000516883 86 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 TGIF1P1-201ENST00000558095 802 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC015917.1-201ENST00000579654 510 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 Y_RNA.804-201ENST00000615262 101 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC104985.2-201ENST00000620598 500 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 U4.6-201ENST00000621618 127 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC091953.5-201ENST00000622919 233 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 MTND1P37-201ENST00000636562 264 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
LONRF3Q496Y0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
LONRF3Q496Y0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LONRF3Q496Y0 FAM35CP-201ENST00000554755 2470 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LONRF3Q496Y0 CBX3P1-201ENST00000325243 554 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 RNU6-198P-201ENST00000384258 104 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LONRF3Q496Y0 AC114491.1-201ENST00000416095 246 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.96□□□□□ -1.78
LONRF3Q496Y0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.96□□□□□ -1.78
LONRF3Q496Y0 RPL39P36-201ENST00000490784 156 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.96□□□□□ -1.78
LONRF3Q496Y0 EIF4EP3-201ENST00000498782 656 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 RNU6-927P-201ENST00000516199 100 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 RNU6-875P-201ENST00000516488 106 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 RN7SKP258-201ENST00000517151 304 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 SUB1P1-201ENST00000524415 382 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 OR5B19P-201ENST00000531766 928 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 OR5AL2P-201ENST00000532185 920 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.96□□□□□ -1.78
LONRF3Q496Y0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.96□□□□□ -1.78
LONRF3Q496Y0 AC024619.4-201ENST00000580924 316 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 AC091135.1-201ENST00000585943 307 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 UBE2V2P2-201ENST00000587677 504 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 AC067852.3-201ENST00000589177 561 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.96□□□□□ -1.78
LONRF3Q496Y0 AC010338.1-201ENST00000621823 717 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.96□□□□□ -1.78
LONRF3Q496Y0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.96□□□□□ -1.78
LONRF3Q496Y0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.96□□□□□ -1.78
LONRF3Q496Y0 AC099654.7-201ENST00000635788 2127 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LONRF3Q496Y0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.95□□□□□ -1.78
LONRF3Q496Y0 FRG1CP-201ENST00000358464 769 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 RNU6-179P-201ENST00000363350 107 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 Y_RNA.245-201ENST00000364493 95 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 Y_RNA.279-201ENST00000364763 95 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 RNU6-140P-201ENST00000384566 108 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 RNU6-373P-201ENST00000411247 98 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.95□□□□□ -1.78
LONRF3Q496Y0 RPL36AP53-201ENST00000432891 316 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 RPL36AP6-201ENST00000435770 321 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 HMGB3P11-201ENST00000440127 604 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 NEFMP1-201ENST00000443423 1006 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 AL357552.1-201ENST00000445254 415 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 PMCHL2-203ENST00000457791 237 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 AP000852.1-201ENST00000472460 573 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 RN7SL432P-201ENST00000484057 298 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 HMGN1P12-201ENST00000499125 195 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.95□□□□□ -1.78
LONRF3Q496Y0 RN7SKP219-201ENST00000516825 296 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 MIR2276-201ENST00000516886 89 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.95□□□□□ -1.78
LONRF3Q496Y0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.95□□□□□ -1.78
LONRF3Q496Y0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.95□□□□□ -1.78
LONRF3Q496Y0 NCAPGP2-201ENST00000557911 754 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.95□□□□□ -1.78
LONRF3Q496Y0 AC010525.2-201ENST00000590920 195 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.95□□□□□ -1.78
LONRF3Q496Y0 AC107294.3-201ENST00000609211 526 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 MIR7975-201ENST00000619350 68 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.95□□□□□ -1.78
LONRF3Q496Y0 AC058791.1-201ENST00000608412 3198 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 AL354685.2-201ENST00000448218 1447 ntBASIC3.95□□□□□ -1.78
LONRF3Q496Y0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LONRF3Q496Y0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms