Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.71□□□□□ -2.14
SSX1Q16384 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
SSX1Q16384 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.71□□□□□ -2.14
SSX1Q16384 PPP1R2P5-201ENST00000457256 603 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 AC005410.1-202ENST00000460347 485 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 AC072039.1-201ENST00000477611 581 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 RPL23AP41-201ENST00000484754 458 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 AC068781.1-201ENST00000488231 618 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.71□□□□□ -2.14
SSX1Q16384 RPF2P2-201ENST00000504693 896 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.71□□□□□ -2.14
SSX1Q16384 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.71□□□□□ -2.14
SSX1Q16384 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.71□□□□□ -2.14
SSX1Q16384 RNA5SP216-201ENST00000516111 123 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.71□□□□□ -2.14
SSX1Q16384 AC087276.1-201ENST00000529659 480 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.71□□□□□ -2.14
SSX1Q16384 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.71□□□□□ -2.14
SSX1Q16384 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.71□□□□□ -2.14
SSX1Q16384 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.71□□□□□ -2.14
SSX1Q16384 MIR3167-201ENST00000579623 85 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 AC105245.1-201ENST00000581934 244 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 MIR4293-201ENST00000584305 78 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 NRBF2P1-201ENST00000587407 859 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 AC024581.2-201ENST00000619986 252 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 MIR219B-201ENST00000637023 88 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 AC099786.3-201ENST00000565735 1410 ntBASIC1.71□□□□□ -2.14
SSX1Q16384 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
SSX1Q16384 AL136360.1-201ENST00000503377 1900 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 HSPA8P4-201ENST00000511877 1920 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 RNU1-91P-201ENST00000364746 163 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 AL023284.1-201ENST00000403956 276 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 RNU4-53P-201ENST00000410828 140 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.7□□□□□ -2.14
SSX1Q16384 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.7□□□□□ -2.14
SSX1Q16384 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.7□□□□□ -2.14
SSX1Q16384 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.7□□□□□ -2.14
SSX1Q16384 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.7□□□□□ -2.14
SSX1Q16384 AC055855.1-201ENST00000489563 579 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 AC139453.3-201ENST00000493276 369 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SSX1Q16384 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.7□□□□□ -2.14
SSX1Q16384 AC010587.2-201ENST00000511727 448 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 MIR892C-201ENST00000516410 77 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 RNU6-64P-201ENST00000517119 105 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.7□□□□□ -2.14
SSX1Q16384 AL121821.2-201ENST00000556081 394 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 AL133241.1-201ENST00000556832 487 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 ROCK1P1-201ENST00000573767 549 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.7□□□□□ -2.14
SSX1Q16384 AC091057.3-201ENST00000602684 733 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SSX1Q16384 AC018645.2-201ENST00000609151 472 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 AC011939.3-201ENST00000613686 466 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 AP001486.3-201ENST00000615334 372 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 YWHAEP7-203ENST00000622054 312 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.7□□□□□ -2.14
SSX1Q16384 AC099654.8-201ENST00000637757 681 ntBASIC1.7□□□□□ -2.14
SSX1Q16384 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SSX1Q16384 AL359854.1-201ENST00000614203 1594 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 AC104454.1-201ENST00000421341 1401 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 AL354685.2-201ENST00000448218 1447 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 NACAP2-201ENST00000318548 624 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 SNORD48-201ENST00000364953 64 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX1Q16384 RNU6-19P-201ENST00000384718 107 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 RNU2-20P-201ENST00000410425 191 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 ZNF90P2-204ENST00000419323 1075 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.69□□□□□ -2.14
SSX1Q16384 MTCO2P20-201ENST00000437339 673 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 AC004383.1-201ENST00000438135 289 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX1Q16384 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX1Q16384 RNA5SP233-201ENST00000459153 113 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 AC126389.1-201ENST00000477436 290 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX1Q16384 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SSX1Q16384 HSPE1P18-201ENST00000517602 280 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX1Q16384 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX1Q16384 CBX3P7-201ENST00000532876 502 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX1Q16384 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX1Q16384 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.69□□□□□ -2.14
SSX1Q16384 AC073544.2-201ENST00000601155 540 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 AC112220.3-201ENST00000605502 502 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 AF129408.1-201ENST00000608767 431 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 MIR6873-201ENST00000622788 63 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 AL136313.1-201ENST00000624804 202 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SSX1Q16384 AP000776.1-201ENST00000530032 1663 ntBASIC1.69□□□□□ -2.14
SSX1Q16384 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SSX1Q16384 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SSX1Q16384 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SSX1Q16384 RNU6-486P-201ENST00000363116 107 ntBASIC1.68□□□□□ -2.14
SSX1Q16384 RNU6-188P-201ENST00000364207 107 ntBASIC1.68□□□□□ -2.14
SSX1Q16384 RNU1-148P-201ENST00000384472 162 ntBASIC1.68□□□□□ -2.14
SSX1Q16384 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SSX1Q16384 VN1R51P-201ENST00000411675 945 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms