Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.66□□□□□ -1.98
PTCH1Q13635 USP9YP17-201ENST00000444617 696 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 RPL23AP7-203ENST00000449021 469 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 ZNF886P-201ENST00000450781 723 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 MTAPP1-201ENST00000489154 819 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 AC114786.4-201ENST00000508771 728 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.66□□□□□ -1.98
PTCH1Q13635 AC113155.1-201ENST00000511141 769 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 AC114797.1-201ENST00000514003 728 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 RPPH1-2P-201ENST00000516688 293 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 RN7SKP40-201ENST00000517211 242 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.66□□□□□ -1.98
PTCH1Q13635 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.66□□□□□ -1.98
PTCH1Q13635 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.66□□□□□ -1.98
PTCH1Q13635 RPS3AP4-201ENST00000555161 764 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 AC087465.1-201ENST00000560574 245 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.66□□□□□ -1.98
PTCH1Q13635 AC005951.2-201ENST00000576282 495 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 AC131235.4-201ENST00000609288 620 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 AC034102.8-201ENST00000615146 484 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 AC097655.1-201ENST00000635075 318 ntBASIC2.66□□□□□ -1.98
PTCH1Q13635 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PTCH1Q13635 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PTCH1Q13635 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PTCH1Q13635 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PTCH1Q13635 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PTCH1Q13635 CKAP2P1-201ENST00000555477 2049 ntBASIC2.65□□□□□ -1.98
PTCH1Q13635 AC011477.1-204ENST00000623416 1325 ntBASIC2.65□□□□□ -1.98
PTCH1Q13635 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
PTCH1Q13635 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.65□□□□□ -1.99
PTCH1Q13635 RNU6-289P-201ENST00000364093 107 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 Y_RNA.224-201ENST00000364308 111 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 RNU6-744P-201ENST00000365557 107 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 RNU1-109P-201ENST00000383960 147 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 RNU6-1316P-201ENST00000384242 108 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 SNORA51.11-201ENST00000384442 131 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 RNU6-140P-201ENST00000384566 108 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 AL590084.2-201ENST00000401481 382 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 AL109755.1-201ENST00000401791 649 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 RNA5SP338-201ENST00000410495 85 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 USP9YP33-201ENST00000412220 421 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.65□□□□□ -1.99
PTCH1Q13635 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.65□□□□□ -1.99
PTCH1Q13635 AC098614.2-201ENST00000426040 255 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.65□□□□□ -1.99
PTCH1Q13635 USP9YP35-201ENST00000435696 412 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.65□□□□□ -1.99
PTCH1Q13635 EEF1A1P39-201ENST00000440791 250 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.65□□□□□ -1.99
PTCH1Q13635 AC134050.1-201ENST00000495088 933 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.65□□□□□ -1.99
PTCH1Q13635 AC117532.1-201ENST00000514638 323 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 SNORA25.15-201ENST00000516487 89 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 RN7SKP287-201ENST00000516546 266 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 RNU6-250P-201ENST00000516958 103 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 NRON-201ENST00000517270 370 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.65□□□□□ -1.99
PTCH1Q13635 GLYCAM1-201ENST00000546596 285 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 AL391261.3-201ENST00000557194 520 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.65□□□□□ -1.99
PTCH1Q13635 AC009712.1-201ENST00000564938 316 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 SNRPGP19-201ENST00000603826 189 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 AL357094.1-201ENST00000603845 844 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 AC116618.1-201ENST00000634617 774 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 MTND1P37-201ENST00000636562 264 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.65□□□□□ -1.99
PTCH1Q13635 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PTCH1Q13635 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.65□□□□□ -1.99
PTCH1Q13635 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PTCH1Q13635 CCT4P2-201ENST00000233836 1548 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 MIRLET7G-201ENST00000362280 84 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 RNU1-39P-201ENST00000383897 165 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 MIR1276-201ENST00000408707 83 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 AL513331.1-201ENST00000411908 397 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 USP9YP27-201ENST00000418455 438 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 XKRYP1-201ENST00000423438 492 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.64□□□□□ -1.99
PTCH1Q13635 XKRYP2-201ENST00000432915 492 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.64□□□□□ -1.99
PTCH1Q13635 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.64□□□□□ -1.99
PTCH1Q13635 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.64□□□□□ -1.99
PTCH1Q13635 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.64□□□□□ -1.99
PTCH1Q13635 AL139824.2-201ENST00000458731 1095 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 RNU6-717P-201ENST00000459076 104 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 SUMO2P6-201ENST00000505273 288 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 MRPS36P2-201ENST00000512569 299 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 RNU6-311P-201ENST00000516224 102 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.64□□□□□ -1.99
PTCH1Q13635 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.64□□□□□ -1.99
PTCH1Q13635 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.64□□□□□ -1.99
PTCH1Q13635 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.64□□□□□ -1.99
PTCH1Q13635 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.64□□□□□ -1.99
PTCH1Q13635 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.64□□□□□ -1.99
PTCH1Q13635 AC234772.3-201ENST00000602277 528 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 AC093424.1-201ENST00000604999 338 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 AC090186.1-201ENST00000605991 572 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 AC245297.2-201ENST00000610119 565 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms