Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AP005901.5-201ENST00000545779 1796 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 Y_RNA.25-201ENST00000362528 102 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 Y_RNA.245-201ENST00000364493 95 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 PTGES3P2-201ENST00000407942 482 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 RPL26P27-201ENST00000414397 437 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.42□□□□□ -2.18
H3F3AP84243 MOB1AP2-201ENST00000446060 614 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 HMGN2P10-201ENST00000448085 265 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 CECR9-201ENST00000453421 199 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 USP9YP10-201ENST00000454868 628 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.42□□□□□ -2.18
H3F3AP84243 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.42□□□□□ -2.18
H3F3AP84243 CYP2C59P-201ENST00000457790 269 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 snoU13.8-201ENST00000458890 104 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 AC096745.1-201ENST00000509945 370 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.42□□□□□ -2.18
H3F3AP84243 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.42□□□□□ -2.18
H3F3AP84243 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 AP005435.4-201ENST00000529514 284 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 DUXAP5-201ENST00000529668 529 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
H3F3AP84243 GNAI2P1-201ENST00000541815 315 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 AC006518.2-201ENST00000542513 940 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.42□□□□□ -2.18
H3F3AP84243 AL121821.2-201ENST00000556081 394 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.42□□□□□ -2.18
H3F3AP84243 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.42□□□□□ -2.18
H3F3AP84243 AC138915.2-201ENST00000569776 97 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
H3F3AP84243 MIR4285-201ENST00000581001 85 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 AC126118.1-201ENST00000607744 628 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.42□□□□□ -2.18
H3F3AP84243 MIR1322-201ENST00000638013 71 ntBASIC1.42□□□□□ -2.18
H3F3AP84243 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.41□□□□□ -2.18
H3F3AP84243 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
H3F3AP84243 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
H3F3AP84243 SNRPEP3-201ENST00000338402 276 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
H3F3AP84243 U8.3-201ENST00000363321 132 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 SNORA8-201ENST00000384574 139 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 SNORA67.5-201ENST00000391036 107 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 TPMTP3-201ENST00000411928 735 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.41□□□□□ -2.18
H3F3AP84243 MTCO2P5-201ENST00000422621 426 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 AL355994.1-201ENST00000424379 260 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.41□□□□□ -2.18
H3F3AP84243 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.41□□□□□ -2.18
H3F3AP84243 AMD1P1-201ENST00000457220 922 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 AC104685.1-201ENST00000502445 371 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
H3F3AP84243 AC023632.1-201ENST00000518463 375 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.41□□□□□ -2.18
H3F3AP84243 AC015712.3-201ENST00000559380 164 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 ROCK1P1-201ENST00000573767 549 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 AC090079.2-201ENST00000575289 768 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 BNIP3P25-201ENST00000596023 559 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 AL139344.1-201ENST00000605228 195 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 AC108479.2-201ENST00000617314 601 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 AL109620.1-201ENST00000618738 1197 ntBASIC1.41□□□□□ -2.18
H3F3AP84243 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
H3F3AP84243 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
H3F3AP84243 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.4□□□□□ -2.19
H3F3AP84243 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.4□□□□□ -2.19
H3F3AP84243 MTND4P23-201ENST00000447723 1363 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 MIR126-201ENST00000362291 85 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 Y_RNA.234-201ENST00000364409 97 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 U6.112-201ENST00000384129 70 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 RPL7P27-201ENST00000403775 720 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 TXNP7-201ENST00000406296 293 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 LUZP4P1-201ENST00000415420 344 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.4□□□□□ -2.19
H3F3AP84243 PTGES3P4-201ENST00000426243 356 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 AL445669.1-201ENST00000426743 755 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.4□□□□□ -2.19
H3F3AP84243 AC010153.1-201ENST00000432862 727 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 ZFAND6P1-201ENST00000434138 605 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 NANOGP2-201ENST00000435391 727 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 RSU1P2-202ENST00000437884 485 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 USP9YP22-201ENST00000438971 294 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.4□□□□□ -2.19
H3F3AP84243 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 SNORD13-201ENST00000459299 104 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.4□□□□□ -2.19
H3F3AP84243 RPL36AP48-201ENST00000485521 314 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 AC092902.1-201ENST00000486999 259 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 AC140059.1-201ENST00000489238 361 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
H3F3AP84243 RNU6-1261P-201ENST00000517194 104 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.4□□□□□ -2.19
H3F3AP84243 AC044913.1-201ENST00000557200 430 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.4□□□□□ -2.19
H3F3AP84243 ZNF92P2-201ENST00000600543 1059 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 OR4H6P-202ENST00000603819 340 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.4□□□□□ -2.19
H3F3AP84243 AC109454.4-201ENST00000623411 649 ntBASIC1.4□□□□□ -2.19
H3F3AP84243 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.4□□□□□ -2.19
H3F3AP84243 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.4□□□□□ -2.19
H3F3AP84243 SNORA25B-201ENST00000365507 128 ntBASIC1.39□□□□□ -2.19
H3F3AP84243 AC097463.2-201ENST00000421074 142 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms