Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RPL7P49-201ENST00000471402 708 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 RPL7P43-201ENST00000478876 753 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 RPS29P19-201ENST00000479709 171 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 RPL32P34-201ENST00000486380 400 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 AC011005.2-201ENST00000487324 359 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX6-1P78426 RNU1-86P-201ENST00000516108 154 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 RNU1-107P-201ENST00000516617 154 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 RNU6-1332P-201ENST00000516666 104 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX6-1P78426 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX6-1P78426 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.61□□□□□ -1.83
NKX6-1P78426 AMZ2P1-203ENST00000565833 850 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.61□□□□□ -1.83
NKX6-1P78426 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.61□□□□□ -1.83
NKX6-1P78426 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.61□□□□□ -1.83
NKX6-1P78426 MIR3672-201ENST00000584290 82 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 AC023043.2-201ENST00000589678 1026 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 AC007938.3-201ENST00000604965 623 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 AC069200.1-201ENST00000609511 323 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 ATP5A1P2-202ENST00000616464 443 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX6-1P78426 AC039056.2-201ENST00000622261 511 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 AC073308.1-201ENST00000623696 305 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX6-1P78426 AL133216.2-202ENST00000634512 349 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 MIR1302-1-201ENST00000637932 143 ntBASIC3.61□□□□□ -1.83
NKX6-1P78426 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.61□□□□□ -1.83
NKX6-1P78426 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX6-1P78426 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NKX6-1P78426 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX6-1P78426 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.6□□□□□ -1.83
NKX6-1P78426 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX6-1P78426 SNORD116-11-201ENST00000383882 92 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 AL356057.2-201ENST00000403318 432 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 AC074085.1-201ENST00000413598 418 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 RPL26P27-201ENST00000414397 437 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX6-1P78426 AL445584.1-201ENST00000431451 330 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 AL359672.1-201ENST00000442302 409 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX6-1P78426 NDUFB4P9-201ENST00000511646 388 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 RNU1-103P-201ENST00000516502 125 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 RNU6-1088P-201ENST00000516850 104 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 RNU6-928P-201ENST00000516876 104 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX6-1P78426 AC025423.5-201ENST00000550230 219 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 HIGD1AP1-201ENST00000550979 275 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 AL360157.1-201ENST00000565962 87 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.6□□□□□ -1.83
NKX6-1P78426 AC007151.1-201ENST00000572774 483 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 MIR4790-201ENST00000577799 79 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 AC138761.3-201ENST00000579993 334 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 OR1M4P-201ENST00000589199 287 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 RNU6-85P-201ENST00000605989 107 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 AC128687.2-201ENST00000609657 566 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 AL138726.1-201ENST00000614873 333 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 MIR7151-201ENST00000617477 60 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX6-1P78426 FAM35DP-201ENST00000323387 2712 ntBASIC3.6□□□□□ -1.83
NKX6-1P78426 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX6-1P78426 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NKX6-1P78426 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX6-1P78426 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NKX6-1P78426 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NKX6-1P78426 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX6-1P78426 AC008725.1-201ENST00000605123 2263 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NKX6-1P78426 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NKX6-1P78426 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
NKX6-1P78426 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NKX6-1P78426 SNORD3E-201ENST00000362899 217 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 RNU6-166P-201ENST00000384371 107 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 RNU1-89P-201ENST00000384592 164 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 MIR10A-201ENST00000385043 110 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 RNA5SP306-201ENST00000411087 107 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.59□□□□□ -1.83
NKX6-1P78426 AL592148.1-201ENST00000413568 445 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.59□□□□□ -1.83
NKX6-1P78426 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX6-1P78426 MTND4P28-201ENST00000426217 387 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 HMGB1P9-201ENST00000429856 646 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX6-1P78426 UBE2V1P7-201ENST00000446395 340 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 MTATP6P7-201ENST00000453315 681 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX6-1P78426 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.59□□□□□ -1.83
NKX6-1P78426 CEACAMP4-201ENST00000457676 421 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 AF213884.1-201ENST00000488102 463 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 AC008526.1-201ENST00000509149 338 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.59□□□□□ -1.83
NKX6-1P78426 RNA5SP454-201ENST00000517231 127 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX6-1P78426 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.59□□□□□ -1.83
NKX6-1P78426 AC026371.1-201ENST00000551867 419 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 AC022655.2-201ENST00000577280 318 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 MIR4795-201ENST00000584182 89 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NKX6-1P78426 AC068831.7-201ENST00000616954 363 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms