Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AL139098.1-201ENST00000407291 389 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 RNU6-1328P-201ENST00000410938 106 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 VN1R108P-201ENST00000431580 830 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.01□□□□□ -2.25
ABCA4P78363 AC023790.1-201ENST00000482174 347 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 CR383656.8-201ENST00000549046 145 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AC008127.2-201ENST00000549925 1075 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.01□□□□□ -2.25
ABCA4P78363 MIR4765-201ENST00000585007 77 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AC020658.4-201ENST00000613987 684 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AC109809.1-201ENST00000619665 545 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AC099842.1-201ENST00000619919 596 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AC068057.2-201ENST00000624047 895 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AL159972.1-201ENST00000625150 448 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.01□□□□□ -2.25
ABCA4P78363 AC025263.3-201ENST00000622965 1396 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
ABCA4P78363 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
ABCA4P78363 U3.13-201ENST00000364804 214 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 RNA5SP240-201ENST00000365355 128 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 Y_RNA.390-201ENST00000383932 102 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 MIR216A-201ENST00000385063 110 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AL109913.1-201ENST00000421173 514 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 PGBD4P6-201ENST00000421501 610 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.01□□□□□ -2.25
ABCA4P78363 RAB11AP1-201ENST00000442978 646 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 DUXAP8-207ENST00000456786 622 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.01□□□□□ -2.25
ABCA4P78363 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.01□□□□□ -2.25
ABCA4P78363 MIR892C-201ENST00000516410 77 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.01□□□□□ -2.25
ABCA4P78363 AC036111.3-201ENST00000526389 112 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 HSPE1P4-201ENST00000550617 308 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.01□□□□□ -2.25
ABCA4P78363 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.01□□□□□ -2.25
ABCA4P78363 GAS5-AS1-201ENST00000602767 694 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AL590095.2-201ENST00000604136 117 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AC243773.3-201ENST00000613270 256 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AC109454.4-201ENST00000623411 649 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 AC073592.7-201ENST00000623659 507 ntBASIC1.01□□□□□ -2.25
ABCA4P78363 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1□□□□□ -2.25
ABCA4P78363 RNU6-741P-201ENST00000383889 107 ntBASIC1□□□□□ -2.25
ABCA4P78363 RNU6-217P-201ENST00000384164 104 ntBASIC1□□□□□ -2.25
ABCA4P78363 MIR193B-201ENST00000384907 83 ntBASIC1□□□□□ -2.25
ABCA4P78363 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1□□□□□ -2.25
ABCA4P78363 RNA5SP465-201ENST00000391195 109 ntBASIC1□□□□□ -2.25
ABCA4P78363 AL355615.1-201ENST00000406187 641 ntBASIC1□□□□□ -2.25
ABCA4P78363 RNU2-63P-201ENST00000410792 194 ntBASIC1□□□□□ -2.25
ABCA4P78363 UBE2V1P11-201ENST00000411559 285 ntBASIC1□□□□□ -2.25
ABCA4P78363 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1□□□□□ -2.25
ABCA4P78363 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1□□□□□ -2.25
ABCA4P78363 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1□□□□□ -2.25
ABCA4P78363 SNORA31.23-201ENST00000517219 133 ntBASIC1□□□□□ -2.25
ABCA4P78363 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1□□□□□ -2.25
ABCA4P78363 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1□□□□□ -2.25
ABCA4P78363 AP005597.4-201ENST00000526762 229 ntBASIC1□□□□□ -2.25
ABCA4P78363 AC124947.2-202ENST00000552735 133 ntBASIC1□□□□□ -2.25
ABCA4P78363 AC087465.1-201ENST00000560574 245 ntBASIC1□□□□□ -2.25
ABCA4P78363 MIR1273G-201ENST00000577677 100 ntBASIC1□□□□□ -2.25
ABCA4P78363 AL022067.1-201ENST00000602426 454 ntBASIC1□□□□□ -2.25
ABCA4P78363 AC103810.8-201ENST00000607347 118 ntBASIC1□□□□□ -2.25
ABCA4P78363 DUXAP10-204ENST00000612052 616 ntBASIC1□□□□□ -2.25
ABCA4P78363 AL627230.5-201ENST00000619807 58 ntBASIC1□□□□□ -2.25
ABCA4P78363 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1□□□□□ -2.25
ABCA4P78363 AC018630.2-201ENST00000534866 2403 ntBASIC1□□□□□ -2.25
ABCA4P78363 RNU6-1339P-201ENST00000363574 91 ntBASIC1□□□□□ -2.25
ABCA4P78363 SNORD114-27-201ENST00000363766 70 ntBASIC1□□□□□ -2.25
ABCA4P78363 RNU4-91P-201ENST00000364778 135 ntBASIC1□□□□□ -2.25
ABCA4P78363 RNU6-203P-201ENST00000384038 104 ntBASIC1□□□□□ -2.25
ABCA4P78363 RNU1-139P-201ENST00000391307 165 ntBASIC1□□□□□ -2.25
ABCA4P78363 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1□□□□□ -2.25
ABCA4P78363 AC008850.1-201ENST00000427546 362 ntBASIC1□□□□□ -2.25
ABCA4P78363 MTND2P21-201ENST00000436242 1042 ntBASIC1□□□□□ -2.25
ABCA4P78363 RPL26P6-201ENST00000440913 438 ntBASIC1□□□□□ -2.25
ABCA4P78363 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1□□□□□ -2.25
ABCA4P78363 AC021382.1-201ENST00000483523 359 ntBASIC1□□□□□ -2.25
ABCA4P78363 AC020699.1-201ENST00000505161 445 ntBASIC1□□□□□ -2.25
ABCA4P78363 AC022483.1-201ENST00000514020 567 ntBASIC1□□□□□ -2.25
ABCA4P78363 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1□□□□□ -2.25
ABCA4P78363 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1□□□□□ -2.25
ABCA4P78363 AC090970.3-201ENST00000612566 866 ntBASIC1□□□□□ -2.25
ABCA4P78363 AC090132.2-201ENST00000615881 347 ntBASIC1□□□□□ -2.25
ABCA4P78363 AC073968.1-201ENST00000618594 637 ntBASIC1□□□□□ -2.25
ABCA4P78363 AL359854.1-201ENST00000614203 1594 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 RNU6-716P-201ENST00000365621 103 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 RNU2-15P-201ENST00000410692 191 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.99□□□□□ -2.25
ABCA4P78363 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.99□□□□□ -2.25
ABCA4P78363 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA4P78363 AC108059.3-201ENST00000456388 214 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 RPL32P14-201ENST00000463196 378 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.99□□□□□ -2.25
ABCA4P78363 AC022880.1-201ENST00000534017 973 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA4P78363 AP001269.3-201ENST00000588718 329 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA4P78363 AC104763.3-201ENST00000613765 618 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA4P78363 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.99□□□□□ -2.25
ABCA4P78363 AC007785.2-201ENST00000598627 1916 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms