Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SNORA64.4-201ENST00000516632 81 ntBASIC3.17□□□□□ -1.9
CDH12P55289 IGKV2D-19-201ENST00000523346 262 ntBASIC3.17□□□□□ -1.9
CDH12P55289 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH12P55289 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH12P55289 AC243972.3-201ENST00000539655 198 ntBASIC3.17□□□□□ -1.9
CDH12P55289 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.17□□□□□ -1.9
CDH12P55289 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CDH12P55289 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH12P55289 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH12P55289 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CDH12P55289 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.17□□□□□ -1.9
CDH12P55289 FGF7P1-201ENST00000582820 288 ntBASIC3.17□□□□□ -1.9
CDH12P55289 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH12P55289 XIST_intron.1-201ENST00000619444 68 ntBASIC3.17□□□□□ -1.9
CDH12P55289 Z99571.1-201ENST00000636677 394 ntBASIC3.17□□□□□ -1.9
CDH12P55289 AC116096.1-201ENST00000566804 2314 ntBASIC3.17□□□□□ -1.9
CDH12P55289 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH12P55289 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH12P55289 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH12P55289 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH12P55289 AC091152.2-201ENST00000591628 2569 ntBASIC3.16□□□□□ -1.9
CDH12P55289 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CDH12P55289 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH12P55289 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH12P55289 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH12P55289 RNU6-371P-201ENST00000364283 108 ntBASIC3.16□□□□□ -1.9
CDH12P55289 SNORD81.2-201ENST00000365153 76 ntBASIC3.16□□□□□ -1.9
CDH12P55289 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH12P55289 RNU6-831P-201ENST00000384548 107 ntBASIC3.16□□□□□ -1.9
CDH12P55289 RPL21P17-201ENST00000397467 475 ntBASIC3.16□□□□□ -1.9
CDH12P55289 HSPE1P26-201ENST00000405341 275 ntBASIC3.16□□□□□ -1.9
CDH12P55289 RNU2-33P-201ENST00000410344 192 ntBASIC3.16□□□□□ -1.9
CDH12P55289 BX682237.1-201ENST00000415016 335 ntBASIC3.16□□□□□ -1.9
CDH12P55289 AC009161.1-201ENST00000417306 376 ntBASIC3.16□□□□□ -1.9
CDH12P55289 ARL5AP1-201ENST00000418991 388 ntBASIC3.16□□□□□ -1.9
CDH12P55289 AC245291.1-201ENST00000419501 328 ntBASIC3.16□□□□□ -1.9
CDH12P55289 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
CDH12P55289 RPL35AP12-201ENST00000425362 338 ntBASIC3.16□□□□□ -1.9
CDH12P55289 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH12P55289 HMGB3P11-201ENST00000440127 604 ntBASIC3.16□□□□□ -1.9
CDH12P55289 PIGFP3-201ENST00000441918 722 ntBASIC3.16□□□□□ -1.9
CDH12P55289 AC009237.8-201ENST00000445492 379 ntBASIC3.16□□□□□ -1.9
CDH12P55289 HMGN2P16-201ENST00000456802 261 ntBASIC3.16□□□□□ -1.9
CDH12P55289 SNORD105B-201ENST00000458770 79 ntBASIC3.16□□□□□ -1.9
CDH12P55289 U3.44-201ENST00000458938 192 ntBASIC3.16□□□□□ -1.9
CDH12P55289 RNU7-66P-201ENST00000459469 62 ntBASIC3.16□□□□□ -1.9
CDH12P55289 RPL21P41-201ENST00000459863 264 ntBASIC3.16□□□□□ -1.9
CDH12P55289 KC877373.1-201ENST00000479066 408 ntBASIC3.16□□□□□ -1.9
CDH12P55289 HMGB3P15-201ENST00000507326 574 ntBASIC3.16□□□□□ -1.9
CDH12P55289 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH12P55289 RNU2-69P-201ENST00000516061 100 ntBASIC3.16□□□□□ -1.9
CDH12P55289 RNU4-49P-201ENST00000516080 140 ntBASIC3.16□□□□□ -1.9
CDH12P55289 AC093331.1-201ENST00000521474 169 ntBASIC3.16□□□□□ -1.9
CDH12P55289 AC104027.1-201ENST00000521887 300 ntBASIC3.16□□□□□ -1.9
CDH12P55289 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH12P55289 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH12P55289 SCOCP1-201ENST00000554676 349 ntBASIC3.16□□□□□ -1.9
CDH12P55289 AC005261.5-201ENST00000596280 355 ntBASIC3.16□□□□□ -1.9
CDH12P55289 AL117336.2-201ENST00000602435 335 ntBASIC3.16□□□□□ -1.9
CDH12P55289 AC107294.1-201ENST00000609524 467 ntBASIC3.16□□□□□ -1.9
CDH12P55289 AL512643.1-201ENST00000635735 524 ntBASIC3.16□□□□□ -1.9
CDH12P55289 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CDH12P55289 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH12P55289 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH12P55289 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH12P55289 AC005183.1-201ENST00000603687 1979 ntBASIC3.16□□□□□ -1.9
CDH12P55289 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH12P55289 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH12P55289 AC017071.1-201ENST00000564407 2204 ntBASIC3.15□□□□□ -1.9
CDH12P55289 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.15□□□□□ -1.9
CDH12P55289 RNU6-797P-201ENST00000363101 109 ntBASIC3.15□□□□□ -1.91
CDH12P55289 Y_RNA.100-201ENST00000363141 102 ntBASIC3.15□□□□□ -1.91
CDH12P55289 Y_RNA.142-201ENST00000363491 102 ntBASIC3.15□□□□□ -1.91
CDH12P55289 Y_RNA.166-201ENST00000363730 102 ntBASIC3.15□□□□□ -1.91
CDH12P55289 RNU6-82P-201ENST00000363970 107 ntBASIC3.15□□□□□ -1.91
CDH12P55289 Y_RNA.263-201ENST00000364659 114 ntBASIC3.15□□□□□ -1.91
CDH12P55289 RNA5SP479-201ENST00000364858 117 ntBASIC3.15□□□□□ -1.91
CDH12P55289 RNU6-741P-201ENST00000383889 107 ntBASIC3.15□□□□□ -1.91
CDH12P55289 RNU6-393P-201ENST00000384475 107 ntBASIC3.15□□□□□ -1.91
CDH12P55289 POLHP1-201ENST00000411806 470 ntBASIC3.15□□□□□ -1.91
CDH12P55289 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDH12P55289 NDUFB4P5-201ENST00000415445 361 ntBASIC3.15□□□□□ -1.91
CDH12P55289 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.15□□□□□ -1.91
CDH12P55289 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH12P55289 AL445584.1-201ENST00000431451 330 ntBASIC3.15□□□□□ -1.91
CDH12P55289 IFNA20P-201ENST00000436840 528 ntBASIC3.15□□□□□ -1.91
CDH12P55289 AC125238.1-201ENST00000448842 249 ntBASIC3.15□□□□□ -1.91
CDH12P55289 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH12P55289 FABP5P15-201ENST00000453566 214 ntBASIC3.15□□□□□ -1.91
CDH12P55289 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.15□□□□□ -1.91
CDH12P55289 MTND1P11-201ENST00000456661 876 ntBASIC3.15□□□□□ -1.91
CDH12P55289 DYNLL1P5-201ENST00000467158 270 ntBASIC3.15□□□□□ -1.91
CDH12P55289 TRBV1-201ENST00000476502 284 ntBASIC3.15□□□□□ -1.91
CDH12P55289 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH12P55289 AL160314.1-201ENST00000490836 438 ntBASIC3.15□□□□□ -1.91
CDH12P55289 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.15□□□□□ -1.91
CDH12P55289 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.15□□□□□ -1.91
CDH12P55289 RN7SKP18-201ENST00000516005 275 ntBASIC3.15□□□□□ -1.91
CDH12P55289 AC087241.2-201ENST00000535801 324 ntBASIC3.15□□□□□ -1.91
CDH12P55289 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms