Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 Y_RNA.86-201ENST00000363020 111 ntBASIC3.67□□□□□ -1.82
COPAP53621 SNORA1.3-201ENST00000384676 136 ntBASIC3.67□□□□□ -1.82
COPAP53621 RNU6-550P-201ENST00000391057 101 ntBASIC3.67□□□□□ -1.82
COPAP53621 CISD1P1-201ENST00000393907 327 ntBASIC3.67□□□□□ -1.82
COPAP53621 RNU6-193P-201ENST00000410977 107 ntBASIC3.67□□□□□ -1.82
COPAP53621 AC080125.1-201ENST00000414888 684 ntBASIC3.67□□□□□ -1.82
COPAP53621 RPL7P46-201ENST00000425129 740 ntBASIC3.67□□□□□ -1.82
COPAP53621 AL121601.2-201ENST00000438019 707 ntBASIC3.67□□□□□ -1.82
COPAP53621 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.67□□□□□ -1.82
COPAP53621 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.67□□□□□ -1.82
COPAP53621 KC877373.1-201ENST00000479066 408 ntBASIC3.67□□□□□ -1.82
COPAP53621 AC117522.3-201ENST00000507974 584 ntBASIC3.67□□□□□ -1.82
COPAP53621 AC098591.2-201ENST00000510152 315 ntBASIC3.67□□□□□ -1.82
COPAP53621 APOOP4-201ENST00000513530 597 ntBASIC3.67□□□□□ -1.82
COPAP53621 RNU6-685P-201ENST00000517088 95 ntBASIC3.67□□□□□ -1.82
COPAP53621 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.67□□□□□ -1.82
COPAP53621 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.67□□□□□ -1.82
COPAP53621 AL133393.1-201ENST00000603277 287 ntBASIC3.67□□□□□ -1.82
COPAP53621 AC022306.2-201ENST00000617563 647 ntBASIC3.67□□□□□ -1.82
COPAP53621 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.67□□□□□ -1.82
COPAP53621 AL354685.2-201ENST00000448218 1447 ntBASIC3.67□□□□□ -1.82
COPAP53621 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COPAP53621 AC073073.2-201ENST00000609827 2578 ntBASIC3.66□□□□□ -1.82
COPAP53621 AC007785.2-201ENST00000598627 1916 ntBASIC3.66□□□□□ -1.82
COPAP53621 AC073346.2-201ENST00000624724 2058 ntBASIC3.66□□□□□ -1.82
COPAP53621 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
COPAP53621 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
COPAP53621 RNU2-33P-201ENST00000410344 192 ntBASIC3.66□□□□□ -1.82
COPAP53621 RNU4-46P-201ENST00000410818 138 ntBASIC3.66□□□□□ -1.82
COPAP53621 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.66□□□□□ -1.82
COPAP53621 HSPE1P1-201ENST00000421494 318 ntBASIC3.66□□□□□ -1.82
COPAP53621 TMEM167AP1-201ENST00000423409 219 ntBASIC3.66□□□□□ -1.82
COPAP53621 AC012498.1-201ENST00000424037 437 ntBASIC3.66□□□□□ -1.82
COPAP53621 AC097713.2-201ENST00000430199 356 ntBASIC3.66□□□□□ -1.82
COPAP53621 RPL36AP53-201ENST00000432891 316 ntBASIC3.66□□□□□ -1.82
COPAP53621 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.66□□□□□ -1.82
COPAP53621 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.66□□□□□ -1.82
COPAP53621 AC098614.3-201ENST00000438957 440 ntBASIC3.66□□□□□ -1.82
COPAP53621 RPS3AP12-201ENST00000443616 753 ntBASIC3.66□□□□□ -1.82
COPAP53621 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.66□□□□□ -1.82
COPAP53621 RBMY2UP-201ENST00000453474 324 ntBASIC3.66□□□□□ -1.82
COPAP53621 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.66□□□□□ -1.82
COPAP53621 RNA5SP310-201ENST00000459084 116 ntBASIC3.66□□□□□ -1.82
COPAP53621 RPL30P5-201ENST00000494923 336 ntBASIC3.66□□□□□ -1.82
COPAP53621 MTCYBP18-201ENST00000501056 747 ntBASIC3.66□□□□□ -1.82
COPAP53621 LRRC34P2-201ENST00000514850 553 ntBASIC3.66□□□□□ -1.82
COPAP53621 RNU6-143P-201ENST00000516942 93 ntBASIC3.66□□□□□ -1.82
COPAP53621 RNA5SP290-201ENST00000517133 127 ntBASIC3.66□□□□□ -1.82
COPAP53621 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.66□□□□□ -1.82
COPAP53621 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.66□□□□□ -1.82
COPAP53621 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.66□□□□□ -1.82
COPAP53621 BNIP3P9-201ENST00000603714 553 ntBASIC3.66□□□□□ -1.82
COPAP53621 AL138889.2-201ENST00000603883 242 ntBASIC3.66□□□□□ -1.82
COPAP53621 AC091953.5-201ENST00000622919 233 ntBASIC3.66□□□□□ -1.82
COPAP53621 MTND1P37-201ENST00000636562 264 ntBASIC3.66□□□□□ -1.82
COPAP53621 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COPAP53621 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.66□□□□□ -1.82
COPAP53621 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COPAP53621 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COPAP53621 TPTE2P4-201ENST00000258589 1605 ntBASIC3.66□□□□□ -1.82
COPAP53621 MTND5P1-201ENST00000445440 1375 ntBASIC3.65□□□□□ -1.82
COPAP53621 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
COPAP53621 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
COPAP53621 Y_RNA.72-201ENST00000362894 103 ntBASIC3.65□□□□□ -1.83
COPAP53621 Y_RNA.245-201ENST00000364493 95 ntBASIC3.65□□□□□ -1.83
COPAP53621 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COPAP53621 MIR325-201ENST00000385260 98 ntBASIC3.65□□□□□ -1.83
COPAP53621 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.65□□□□□ -1.83
COPAP53621 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.65□□□□□ -1.83
COPAP53621 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.65□□□□□ -1.83
COPAP53621 DBIP2-201ENST00000419076 262 ntBASIC3.65□□□□□ -1.83
COPAP53621 AC006989.1-201ENST00000427212 131 ntBASIC3.65□□□□□ -1.83
COPAP53621 AL592045.1-201ENST00000429867 352 ntBASIC3.65□□□□□ -1.83
COPAP53621 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.65□□□□□ -1.83
COPAP53621 AC008155.2-201ENST00000464337 397 ntBASIC3.65□□□□□ -1.83
COPAP53621 TRBV1-201ENST00000476502 284 ntBASIC3.65□□□□□ -1.83
COPAP53621 RPL30P14-201ENST00000482744 348 ntBASIC3.65□□□□□ -1.83
COPAP53621 AC008628.2-201ENST00000502605 298 ntBASIC3.65□□□□□ -1.83
COPAP53621 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.65□□□□□ -1.83
COPAP53621 AC114786.4-201ENST00000508771 728 ntBASIC3.65□□□□□ -1.83
COPAP53621 RNU6-914P-201ENST00000516749 109 ntBASIC3.65□□□□□ -1.83
COPAP53621 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.65□□□□□ -1.83
COPAP53621 BNIP3P6-201ENST00000549284 499 ntBASIC3.65□□□□□ -1.83
COPAP53621 TRAV28-201ENST00000557548 323 ntBASIC3.65□□□□□ -1.83
COPAP53621 AL138976.2-201ENST00000563989 694 ntBASIC3.65□□□□□ -1.83
COPAP53621 MIR3200-201ENST00000580767 85 ntBASIC3.65□□□□□ -1.83
COPAP53621 AL161798.1-201ENST00000604630 131 ntBASIC3.65□□□□□ -1.83
COPAP53621 MIR15A-201ENST00000607334 83 ntBASIC3.65□□□□□ -1.83
COPAP53621 AC025253.1-201ENST00000613623 543 ntBASIC3.65□□□□□ -1.83
COPAP53621 AL442067.2-201ENST00000614033 363 ntBASIC3.65□□□□□ -1.83
COPAP53621 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COPAP53621 AC100810.6-201ENST00000638068 285 ntBASIC3.65□□□□□ -1.83
COPAP53621 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.65□□□□□ -1.83
COPAP53621 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.65□□□□□ -1.83
COPAP53621 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COPAP53621 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.65□□□□□ -1.83
COPAP53621 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COPAP53621 MTND4P12-201ENST00000498999 1377 ntBASIC3.64□□□□□ -1.83
COPAP53621 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
COPAP53621 RNA5SP50-201ENST00000363731 107 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms