Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 U6.42-201ENST00000618440 107 ntBASIC3.2□□□□□ -1.9
RXRGP48443 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RXRGP48443 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.2□□□□□ -1.9
RXRGP48443 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RXRGP48443 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RXRGP48443 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RXRGP48443 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RXRGP48443 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.19□□□□□ -1.9
RXRGP48443 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RXRGP48443 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.19□□□□□ -1.9
RXRGP48443 SNORA4.3-201ENST00000365564 137 ntBASIC3.19□□□□□ -1.9
RXRGP48443 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RXRGP48443 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RXRGP48443 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RXRGP48443 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.19□□□□□ -1.9
RXRGP48443 RNU2-25P-201ENST00000411041 191 ntBASIC3.19□□□□□ -1.9
RXRGP48443 KATNBL1P3-201ENST00000443475 909 ntBASIC3.19□□□□□ -1.9
RXRGP48443 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.19□□□□□ -1.9
RXRGP48443 AC022364.2-201ENST00000457963 554 ntBASIC3.19□□□□□ -1.9
RXRGP48443 RPL31P3-201ENST00000458430 332 ntBASIC3.19□□□□□ -1.9
RXRGP48443 AC126389.1-201ENST00000477436 290 ntBASIC3.19□□□□□ -1.9
RXRGP48443 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.19□□□□□ -1.9
RXRGP48443 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.19□□□□□ -1.9
RXRGP48443 AC097462.2-201ENST00000504623 481 ntBASIC3.19□□□□□ -1.9
RXRGP48443 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.19□□□□□ -1.9
RXRGP48443 RNU5F-8P-201ENST00000515941 111 ntBASIC3.19□□□□□ -1.9
RXRGP48443 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.19□□□□□ -1.9
RXRGP48443 PSMA2P1-201ENST00000526365 646 ntBASIC3.19□□□□□ -1.9
RXRGP48443 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.19□□□□□ -1.9
RXRGP48443 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.19□□□□□ -1.9
RXRGP48443 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.19□□□□□ -1.9
RXRGP48443 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.19□□□□□ -1.9
RXRGP48443 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.19□□□□□ -1.9
RXRGP48443 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.19□□□□□ -1.9
RXRGP48443 AC068790.2-201ENST00000602601 557 ntBASIC3.19□□□□□ -1.9
RXRGP48443 AC064872.1-201ENST00000604823 1072 ntBASIC3.19□□□□□ -1.9
RXRGP48443 AC005858.4-201ENST00000623191 700 ntBASIC3.19□□□□□ -1.9
RXRGP48443 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.19□□□□□ -1.9
RXRGP48443 AC010329.5-201ENST00000623497 2174 ntBASIC3.19□□□□□ -1.9
RXRGP48443 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.19□□□□□ -1.9
RXRGP48443 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RXRGP48443 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.19□□□□□ -1.9
RXRGP48443 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
RXRGP48443 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RXRGP48443 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RXRGP48443 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RXRGP48443 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RXRGP48443 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RXRGP48443 SNORA80A-201ENST00000363922 136 ntBASIC3.18□□□□□ -1.9
RXRGP48443 RNU6-1280P-201ENST00000365211 107 ntBASIC3.18□□□□□ -1.9
RXRGP48443 SNORA7.4-201ENST00000384249 137 ntBASIC3.18□□□□□ -1.9
RXRGP48443 Y_RNA.500-201ENST00000384466 111 ntBASIC3.18□□□□□ -1.9
RXRGP48443 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RXRGP48443 RPL21P3-201ENST00000395517 478 ntBASIC3.18□□□□□ -1.9
RXRGP48443 RNU6-195P-201ENST00000411352 109 ntBASIC3.18□□□□□ -1.9
RXRGP48443 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.18□□□□□ -1.9
RXRGP48443 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.18□□□□□ -1.9
RXRGP48443 PTGES3P4-201ENST00000426243 356 ntBASIC3.18□□□□□ -1.9
RXRGP48443 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.18□□□□□ -1.9
RXRGP48443 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.18□□□□□ -1.9
RXRGP48443 RPS20P5-201ENST00000434808 360 ntBASIC3.18□□□□□ -1.9
RXRGP48443 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.18□□□□□ -1.9
RXRGP48443 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.18□□□□□ -1.9
RXRGP48443 AC244505.5-201ENST00000443639 207 ntBASIC3.18□□□□□ -1.9
RXRGP48443 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.18□□□□□ -1.9
RXRGP48443 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.18□□□□□ -1.9
RXRGP48443 AC146507.2-201ENST00000460608 476 ntBASIC3.18□□□□□ -1.9
RXRGP48443 AC107626.1-201ENST00000471084 183 ntBASIC3.18□□□□□ -1.9
RXRGP48443 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.18□□□□□ -1.9
RXRGP48443 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.18□□□□□ -1.9
RXRGP48443 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
RXRGP48443 RNU6-123P-201ENST00000516163 102 ntBASIC3.18□□□□□ -1.9
RXRGP48443 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.18□□□□□ -1.9
RXRGP48443 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.18□□□□□ -1.9
RXRGP48443 AC078899.3-201ENST00000599065 212 ntBASIC3.18□□□□□ -1.9
RXRGP48443 AL391813.1-201ENST00000603098 260 ntBASIC3.18□□□□□ -1.9
RXRGP48443 AC087752.4-201ENST00000605911 462 ntBASIC3.18□□□□□ -1.9
RXRGP48443 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.18□□□□□ -1.9
RXRGP48443 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.18□□□□□ -1.9
RXRGP48443 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.18□□□□□ -1.9
RXRGP48443 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.18□□□□□ -1.9
RXRGP48443 MIR6852-201ENST00000621699 66 ntBASIC3.18□□□□□ -1.9
RXRGP48443 AC025034.2-201ENST00000623264 286 ntBASIC3.18□□□□□ -1.9
RXRGP48443 AC084035.1-201ENST00000634543 607 ntBASIC3.18□□□□□ -1.9
RXRGP48443 CU459211.1-201ENST00000635667 749 ntBASIC3.18□□□□□ -1.9
RXRGP48443 AC103710.2-202ENST00000641454 2853 ntBASIC3.18□□□□□ -1.9
RXRGP48443 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.18□□□□□ -1.9
RXRGP48443 ASNSP3-201ENST00000451989 1306 ntBASIC3.18□□□□□ -1.9
RXRGP48443 AC093831.2-201ENST00000624393 3427 ntBASIC3.17□□□□□ -1.9
RXRGP48443 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RXRGP48443 OR5J1P-201ENST00000313544 939 ntBASIC3.17□□□□□ -1.9
RXRGP48443 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.17□□□□□ -1.9
RXRGP48443 Y_RNA.77-201ENST00000362962 107 ntBASIC3.17□□□□□ -1.9
RXRGP48443 RNU6-1097P-201ENST00000363586 107 ntBASIC3.17□□□□□ -1.9
RXRGP48443 RNU6-169P-201ENST00000365336 107 ntBASIC3.17□□□□□ -1.9
RXRGP48443 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.17□□□□□ -1.9
RXRGP48443 SNORA24.1-201ENST00000384401 135 ntBASIC3.17□□□□□ -1.9
RXRGP48443 CISD1P1-201ENST00000393907 327 ntBASIC3.17□□□□□ -1.9
RXRGP48443 AL031121.1-201ENST00000406553 254 ntBASIC3.17□□□□□ -1.9
RXRGP48443 AC114491.1-201ENST00000416095 246 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms