Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU6-88P-201ENST00000606801 100 ntBASIC2□□□□□ -2.09
RFC3P40938 AC069294.1-201ENST00000608397 350 ntBASIC2□□□□□ -2.09
RFC3P40938 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2□□□□□ -2.09
RFC3P40938 AC010378.1-201ENST00000619270 362 ntBASIC2□□□□□ -2.09
RFC3P40938 AP000720.1-201ENST00000625091 483 ntBASIC2□□□□□ -2.09
RFC3P40938 AL109809.4-201ENST00000603520 2185 ntBASIC2□□□□□ -2.09
RFC3P40938 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2□□□□□ -2.09
RFC3P40938 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
RFC3P40938 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
RFC3P40938 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
RFC3P40938 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RFC3P40938 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RFC3P40938 UBE2L2-201ENST00000254302 429 ntBASIC1.99□□□□□ -2.09
RFC3P40938 RNU4-68P-201ENST00000364314 141 ntBASIC1.99□□□□□ -2.09
RFC3P40938 RNA5SP125-201ENST00000364843 120 ntBASIC1.99□□□□□ -2.09
RFC3P40938 MIR1305-201ENST00000408300 86 ntBASIC1.99□□□□□ -2.09
RFC3P40938 U6atac.2-201ENST00000408644 118 ntBASIC1.99□□□□□ -2.09
RFC3P40938 ZNF90P2-204ENST00000419323 1075 ntBASIC1.99□□□□□ -2.09
RFC3P40938 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.99□□□□□ -2.09
RFC3P40938 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.99□□□□□ -2.09
RFC3P40938 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.99□□□□□ -2.09
RFC3P40938 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.99□□□□□ -2.09
RFC3P40938 RPL30P4-201ENST00000429309 333 ntBASIC1.99□□□□□ -2.09
RFC3P40938 Z98742.2-201ENST00000431564 187 ntBASIC1.99□□□□□ -2.09
RFC3P40938 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC3P40938 RPL36AP53-201ENST00000432891 316 ntBASIC1.99□□□□□ -2.09
RFC3P40938 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.99□□□□□ -2.09
RFC3P40938 AL161651.1-201ENST00000440882 223 ntBASIC1.99□□□□□ -2.09
RFC3P40938 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC3P40938 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC3P40938 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.99□□□□□ -2.09
RFC3P40938 RPL7P18-201ENST00000478965 734 ntBASIC1.99□□□□□ -2.09
RFC3P40938 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.99□□□□□ -2.09
RFC3P40938 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC3P40938 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC3P40938 AC112206.4-201ENST00000515142 405 ntBASIC1.99□□□□□ -2.09
RFC3P40938 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC3P40938 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC3P40938 SNRPGP18-201ENST00000553000 214 ntBASIC1.99□□□□□ -2.09
RFC3P40938 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC3P40938 MTCYBP23-201ENST00000558717 1102 ntBASIC1.99□□□□□ -2.09
RFC3P40938 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC3P40938 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC3P40938 AC022662.1-201ENST00000580252 331 ntBASIC1.99□□□□□ -2.09
RFC3P40938 MIR4293-201ENST00000584305 78 ntBASIC1.99□□□□□ -2.09
RFC3P40938 AC002984.1-201ENST00000591692 448 ntBASIC1.99□□□□□ -2.09
RFC3P40938 AL158827.2-201ENST00000602494 330 ntBASIC1.99□□□□□ -2.09
RFC3P40938 AC103710.1-201ENST00000610003 901 ntBASIC1.99□□□□□ -2.09
RFC3P40938 AC011939.3-201ENST00000613686 466 ntBASIC1.99□□□□□ -2.09
RFC3P40938 AL691447.3-201ENST00000635020 330 ntBASIC1.99□□□□□ -2.09
RFC3P40938 MTND4P1-201ENST00000457501 1466 ntBASIC1.99□□□□□ -2.09
RFC3P40938 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.99□□□□□ -2.09
RFC3P40938 AL359851.1-201ENST00000569460 4997 ntBASIC1.98□□□□□ -2.09
RFC3P40938 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.98□□□□□ -2.09
RFC3P40938 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RFC3P40938 RNU6-1284P-201ENST00000363701 100 ntBASIC1.98□□□□□ -2.09
RFC3P40938 RNU4-92P-201ENST00000363783 136 ntBASIC1.98□□□□□ -2.09
RFC3P40938 SNORA3A-201ENST00000364113 130 ntBASIC1.98□□□□□ -2.09
RFC3P40938 AL355497.1-201ENST00000406262 551 ntBASIC1.98□□□□□ -2.09
RFC3P40938 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.98□□□□□ -2.09
RFC3P40938 AC003685.2-201ENST00000422795 395 ntBASIC1.98□□□□□ -2.09
RFC3P40938 AL445669.1-201ENST00000426743 755 ntBASIC1.98□□□□□ -2.09
RFC3P40938 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.98□□□□□ -2.09
RFC3P40938 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.98□□□□□ -2.09
RFC3P40938 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.98□□□□□ -2.09
RFC3P40938 MTCO2P20-201ENST00000437339 673 ntBASIC1.98□□□□□ -2.09
RFC3P40938 AL031313.1-201ENST00000448435 256 ntBASIC1.98□□□□□ -2.09
RFC3P40938 AC104435.1-201ENST00000483483 166 ntBASIC1.98□□□□□ -2.09
RFC3P40938 AC055855.1-201ENST00000489563 579 ntBASIC1.98□□□□□ -2.09
RFC3P40938 RPF2P2-201ENST00000504693 896 ntBASIC1.98□□□□□ -2.09
RFC3P40938 AC093281.2-201ENST00000510153 597 ntBASIC1.98□□□□□ -2.09
RFC3P40938 RNU6-64P-201ENST00000517119 105 ntBASIC1.98□□□□□ -2.09
RFC3P40938 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
RFC3P40938 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.98□□□□□ -2.09
RFC3P40938 MIR3167-201ENST00000579623 85 ntBASIC1.98□□□□□ -2.09
RFC3P40938 MIR4765-201ENST00000585007 77 ntBASIC1.98□□□□□ -2.09
RFC3P40938 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.98□□□□□ -2.09
RFC3P40938 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.98□□□□□ -2.09
RFC3P40938 AC091057.3-201ENST00000602684 733 ntBASIC1.98□□□□□ -2.09
RFC3P40938 AL592221.1-201ENST00000605266 382 ntBASIC1.98□□□□□ -2.09
RFC3P40938 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.98□□□□□ -2.09
RFC3P40938 AC009090.3-201ENST00000616553 565 ntBASIC1.98□□□□□ -2.09
RFC3P40938 AC012640.5-201ENST00000623897 319 ntBASIC1.98□□□□□ -2.09
RFC3P40938 AC007490.1-201ENST00000624321 703 ntBASIC1.98□□□□□ -2.09
RFC3P40938 PISRT1-201ENST00000626175 531 ntBASIC1.98□□□□□ -2.09
RFC3P40938 AC025048.6-202ENST00000627667 438 ntBASIC1.98□□□□□ -2.09
RFC3P40938 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RFC3P40938 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RFC3P40938 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
RFC3P40938 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RFC3P40938 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RFC3P40938 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.97□□□□□ -2.09
RFC3P40938 RNU6-512P-201ENST00000364438 103 ntBASIC1.97□□□□□ -2.09
RFC3P40938 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.97□□□□□ -2.09
RFC3P40938 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.97□□□□□ -2.09
RFC3P40938 RNU6-658P-201ENST00000384606 106 ntBASIC1.97□□□□□ -2.09
RFC3P40938 MIR504-201ENST00000385065 83 ntBASIC1.97□□□□□ -2.09
RFC3P40938 AL079342.1-201ENST00000401460 267 ntBASIC1.97□□□□□ -2.09
RFC3P40938 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
RFC3P40938 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms