Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AL161729.4-201ENST00000604650 476 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 AL158211.4-201ENST00000606988 584 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 AC008121.3-201ENST00000618726 433 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 AC002550.2-201ENST00000621246 394 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 AL022578.1-201ENST00000439330 1433 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
COL18A1P39060 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL18A1P39060 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL18A1P39060 RNU6-270P-201ENST00000364131 105 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 RNU6-1122P-201ENST00000384449 107 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 MIR767-201ENST00000390228 109 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 AL603865.2-201ENST00000401679 213 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 SRIP3-201ENST00000413200 219 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.77□□□□□ -2.13
COL18A1P39060 RPS20P20-201ENST00000460498 340 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 AC087588.1-201ENST00000462203 316 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 RPS29P1-201ENST00000465274 159 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 RPS15AP34-201ENST00000487776 387 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 TMEM251P1-201ENST00000503717 318 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.77□□□□□ -2.13
COL18A1P39060 CDC42P4-201ENST00000510507 563 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL18A1P39060 AP005660.1-201ENST00000522972 293 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.77□□□□□ -2.13
COL18A1P39060 AC008507.2-201ENST00000588402 1176 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.77□□□□□ -2.13
COL18A1P39060 AC084824.4-201ENST00000620106 731 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 AP003485.1-201ENST00000625093 753 ntBASIC1.77□□□□□ -2.13
COL18A1P39060 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
COL18A1P39060 SNORA63.3-201ENST00000362682 132 ntBASIC1.76□□□□□ -2.13
COL18A1P39060 RNU6-1080P-201ENST00000383982 107 ntBASIC1.76□□□□□ -2.13
COL18A1P39060 MIR514A1-201ENST00000385133 98 ntBASIC1.76□□□□□ -2.13
COL18A1P39060 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
COL18A1P39060 AC007435.1-201ENST00000421086 415 ntBASIC1.76□□□□□ -2.13
COL18A1P39060 UBE2V1P13-201ENST00000436983 439 ntBASIC1.76□□□□□ -2.13
COL18A1P39060 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
COL18A1P39060 RNU6-528P-201ENST00000516926 100 ntBASIC1.76□□□□□ -2.13
COL18A1P39060 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.76□□□□□ -2.13
COL18A1P39060 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.76□□□□□ -2.13
COL18A1P39060 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.76□□□□□ -2.13
COL18A1P39060 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.76□□□□□ -2.13
COL18A1P39060 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.76□□□□□ -2.13
COL18A1P39060 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.76□□□□□ -2.13
COL18A1P39060 HIGD1AP17-201ENST00000554576 276 ntBASIC1.76□□□□□ -2.13
COL18A1P39060 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.76□□□□□ -2.13
COL18A1P39060 AC107308.1-201ENST00000615897 301 ntBASIC1.76□□□□□ -2.13
COL18A1P39060 SNHG22-203ENST00000617833 660 ntBASIC1.76□□□□□ -2.13
COL18A1P39060 MIR6788-201ENST00000618842 66 ntBASIC1.76□□□□□ -2.13
COL18A1P39060 AC079597.1-201ENST00000624306 508 ntBASIC1.76□□□□□ -2.13
COL18A1P39060 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL18A1P39060 AL079343.1-201ENST00000572358 1771 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL18A1P39060 SNORA40.6-201ENST00000391153 128 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 TPMTP2-201ENST00000414372 726 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 MTND4P3-201ENST00000417829 541 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC099548.1-201ENST00000421443 426 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 PPP1R11P2-201ENST00000423543 382 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC008850.1-201ENST00000427546 362 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.75□□□□□ -2.13
COL18A1P39060 snoU13.8-201ENST00000458890 104 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 MTCYBP16-201ENST00000509187 1129 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.75□□□□□ -2.13
COL18A1P39060 AP004607.1-201ENST00000524456 203 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.75□□□□□ -2.13
COL18A1P39060 AC010928.2-201ENST00000588017 287 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC099785.1-201ENST00000605697 437 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC079395.3-201ENST00000615161 484 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AL357080.1-201ENST00000617394 239 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC073308.1-201ENST00000623696 305 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC231657.1-201ENST00000624313 397 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC007785.2-201ENST00000598627 1916 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL18A1P39060 Y_RNA.205-201ENST00000364128 113 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 RNU4-52P-201ENST00000384209 138 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 MIR598-201ENST00000384868 97 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.75□□□□□ -2.13
COL18A1P39060 ERHP2-201ENST00000402323 299 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 HMGB1P17-201ENST00000403495 628 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.75□□□□□ -2.13
COL18A1P39060 MRPS36P1-201ENST00000421291 307 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.75□□□□□ -2.13
COL18A1P39060 AL049734.2-201ENST00000441066 616 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.75□□□□□ -2.13
COL18A1P39060 CALM1P1-201ENST00000442082 433 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.75□□□□□ -2.13
COL18A1P39060 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.75□□□□□ -2.13
COL18A1P39060 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.75□□□□□ -2.13
COL18A1P39060 MTND1P9-201ENST00000453775 944 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.75□□□□□ -2.13
COL18A1P39060 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.75□□□□□ -2.13
COL18A1P39060 AC113155.1-201ENST00000511141 769 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 RNU6-583P-201ENST00000516012 92 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 RNU6-1028P-201ENST00000517164 93 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC025755.1-201ENST00000521306 278 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AP005435.4-201ENST00000529514 284 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 LRRC6P1-201ENST00000532188 885 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.75□□□□□ -2.13
COL18A1P39060 AC068338.1-201ENST00000565567 176 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC068135.2-201ENST00000569293 1028 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms