Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A4P31645 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC6A4P31645 SNORA9-201ENST00000384215 133 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 RNU6-45P-201ENST00000384471 107 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 Y_RNA.534-201ENST00000384599 112 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 MIR34B-201ENST00000385076 84 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 MIR301A-201ENST00000385261 86 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 AL139039.1-201ENST00000401900 692 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC6A4P31645 NDUFB4P7-201ENST00000423198 363 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC6A4P31645 AL590383.1-201ENST00000428602 75 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC6A4P31645 AL356535.1-201ENST00000440335 398 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 RPL21P41-201ENST00000459863 264 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 AC106707.2-201ENST00000484182 374 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC6A4P31645 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC6A4P31645 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC6A4P31645 RNU6-1069P-201ENST00000516612 133 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 RNA5SP454-201ENST00000517231 127 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC6A4P31645 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.78□□□□□ -1.8
SLC6A4P31645 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC6A4P31645 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC6A4P31645 MIR3672-201ENST00000584290 82 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 POLR3GP2-201ENST00000588366 668 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 AL713922.2-201ENST00000619384 716 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC6A4P31645 AC009093.8-201ENST00000641769 292 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC6A4P31645 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC6A4P31645 OR4G2P-202ENST00000641004 1759 ntBASIC3.78□□□□□ -1.8
SLC6A4P31645 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC6A4P31645 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC6A4P31645 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC6A4P31645 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC6A4P31645 FAM35DP-201ENST00000323387 2712 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 UBE2L2-201ENST00000254302 429 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 SNORD9-201ENST00000362566 104 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 MIR607-201ENST00000385241 96 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 snosnR66.1-201ENST00000391095 99 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 MIR450B-201ENST00000401182 78 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 SNORA11.2-201ENST00000408318 127 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 MIR548F5-201ENST00000408421 86 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 RN7SKP158-201ENST00000410453 326 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 RPL37P10-201ENST00000412884 288 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 AL354751.2-201ENST00000415471 210 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 MTCO2P12-201ENST00000427426 682 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC6A4P31645 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.77□□□□□ -1.81
SLC6A4P31645 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC6A4P31645 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC6A4P31645 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.77□□□□□ -1.81
SLC6A4P31645 RNU6-1170P-201ENST00000515974 106 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 RN7SKP18-201ENST00000516005 275 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 RNU6-559P-201ENST00000516151 98 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 SNORA70.18-201ENST00000516696 98 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 RNU6-1088P-201ENST00000516850 104 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 RNU6-1073P-201ENST00000517182 106 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC6A4P31645 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.77□□□□□ -1.81
SLC6A4P31645 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC6A4P31645 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC6A4P31645 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC6A4P31645 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC6A4P31645 ANP32BP3-201ENST00000559213 706 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC6A4P31645 MIR4790-201ENST00000577799 79 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 AC006270.2-201ENST00000578523 652 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.77□□□□□ -1.81
SLC6A4P31645 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.77□□□□□ -1.81
SLC6A4P31645 AC078795.3-201ENST00000602913 472 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 APOOP1-201ENST00000604695 592 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 ATP1B3P1-201ENST00000605365 821 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 AL133215.3-201ENST00000609801 448 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 AC004825.2-201ENST00000616634 455 ntBASIC3.77□□□□□ -1.81
SLC6A4P31645 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC6A4P31645 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SLC6A4P31645 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC6A4P31645 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC6A4P31645 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SLC6A4P31645 AC032011.1-201ENST00000611703 1549 ntBASIC3.76□□□□□ -1.81
SLC6A4P31645 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
SLC6A4P31645 AC007685.1-201ENST00000329806 452 ntBASIC3.76□□□□□ -1.81
SLC6A4P31645 RNU6-1252P-201ENST00000363054 104 ntBASIC3.76□□□□□ -1.81
SLC6A4P31645 Y_RNA.135-201ENST00000363439 95 ntBASIC3.76□□□□□ -1.81
SLC6A4P31645 RNA5SP189-201ENST00000364920 115 ntBASIC3.76□□□□□ -1.81
SLC6A4P31645 SNORD116-11-201ENST00000383882 92 ntBASIC3.76□□□□□ -1.81
SLC6A4P31645 MIR3074-201ENST00000384885 81 ntBASIC3.76□□□□□ -1.81
SLC6A4P31645 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.76□□□□□ -1.81
SLC6A4P31645 AC093578.1-201ENST00000415219 368 ntBASIC3.76□□□□□ -1.81
SLC6A4P31645 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.76□□□□□ -1.81
SLC6A4P31645 HMGN2P31-201ENST00000432430 273 ntBASIC3.76□□□□□ -1.81
SLC6A4P31645 HSPD1P21-201ENST00000436541 245 ntBASIC3.76□□□□□ -1.81
SLC6A4P31645 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.76□□□□□ -1.81
SLC6A4P31645 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.76□□□□□ -1.81
SLC6A4P31645 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.76□□□□□ -1.81
SLC6A4P31645 VN1R17P-201ENST00000472048 1090 ntBASIC3.76□□□□□ -1.81
SLC6A4P31645 RPL31P13-201ENST00000484151 370 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms