Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 USP9YP15-201ENST00000442391 422 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 AC004801.2-202ENST00000463559 283 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 RN7SL432P-201ENST00000484057 298 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 AC010587.1-201ENST00000505809 469 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 AC109927.2-201ENST00000506416 303 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 AC117522.3-201ENST00000507974 584 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXC8P31273 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HOXC8P31273 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXC8P31273 NRBF2P5-201ENST00000603087 788 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 AC245014.2-201ENST00000603689 287 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 AP000860.1-201ENST00000605250 559 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 AC246785.4-201ENST00000605374 287 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 MIR98-201ENST00000606724 119 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXC8P31273 SNHG22-203ENST00000617833 660 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 AC124864.2-201ENST00000624736 186 ntBASIC3.17□□□□□ -1.9
HOXC8P31273 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HOXC8P31273 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
HOXC8P31273 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
HOXC8P31273 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXC8P31273 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC8P31273 SRP72P2-201ENST00000344851 1979 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC8P31273 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC8P31273 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC8P31273 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC8P31273 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXC8P31273 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HOXC8P31273 MIR9-1-201ENST00000385198 89 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 RPL23AP32-201ENST00000395315 459 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 RPS4XP8-201ENST00000402039 771 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 RNA5SP274-201ENST00000410484 108 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 RNU4-55P-201ENST00000410731 137 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 RPS15AP12-201ENST00000419498 388 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 AC007283.2-201ENST00000424739 197 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 ISCA1P1-201ENST00000426679 387 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 AL139415.2-201ENST00000431968 163 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 FCF1P1-201ENST00000432690 571 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.16□□□□□ -1.9
HOXC8P31273 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC8P31273 UBE2V1P8-201ENST00000437166 265 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 C1DP4-201ENST00000455429 424 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXC8P31273 RPS29P12-201ENST00000460178 152 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
HOXC8P31273 ARL4AP2-201ENST00000507378 601 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC8P31273 U4.5-201ENST00000617137 123 ntBASIC3.16□□□□□ -1.9
HOXC8P31273 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC8P31273 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC8P31273 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HOXC8P31273 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC8P31273 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXC8P31273 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC8P31273 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC8P31273 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC8P31273 GABRG2-229ENST00000641017 3628 ntBASIC3.15□□□□□ -1.9
HOXC8P31273 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
HOXC8P31273 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.15□□□□□ -1.9
HOXC8P31273 AL136360.1-201ENST00000503377 1900 ntBASIC3.15□□□□□ -1.9
HOXC8P31273 U3.6-201ENST00000363622 211 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 RNU4-1-201ENST00000363925 141 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 RNU5A-8P-201ENST00000364102 114 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 RNU6-282P-201ENST00000365357 103 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 Y_RNA.372-201ENST00000365599 102 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 RNU6-301P-201ENST00000384277 107 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 RNA5SP354-201ENST00000391247 136 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 RNU2-8P-201ENST00000410727 190 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC8P31273 PIGFP2-201ENST00000421400 651 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC8P31273 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC8P31273 ZNF863P-201ENST00000426746 417 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC8P31273 MRPS10P2-201ENST00000431226 381 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 AC119618.1-201ENST00000434191 222 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 DDX3P2-201ENST00000446138 111 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC8P31273 AC010631.1-201ENST00000474150 156 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 AL160314.1-201ENST00000490836 438 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC8P31273 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXC8P31273 SNORA64.4-201ENST00000516632 81 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 Vault.3-201ENST00000516676 95 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 SNORA31.21-201ENST00000517180 77 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXC8P31273 FAM92A1P1-201ENST00000528023 890 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXC8P31273 ZNF519P2-201ENST00000557032 169 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 MIR3146-201ENST00000580367 79 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 AC008277.2-201ENST00000605196 797 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 AC092954.2-201ENST00000609103 430 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.15□□□□□ -1.91
HOXC8P31273 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
HOXC8P31273 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOXC8P31273 ELF2P3-201ENST00000445099 1506 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC8P31273 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms