Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC239868.4-201ENST00000608318 671 ntBASIC2.54□□□□□ -2
TOP1P11387 MIR6895-201ENST00000613497 78 ntBASIC2.54□□□□□ -2
TOP1P11387 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.54□□□□□ -2
TOP1P11387 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.54□□□□□ -2
TOP1P11387 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.54□□□□□ -2
TOP1P11387 AC231657.1-201ENST00000624313 397 ntBASIC2.54□□□□□ -2
TOP1P11387 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.54□□□□□ -2
TOP1P11387 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TOP1P11387 AC131280.1-202ENST00000624067 4211 ntBASIC2.54□□□□□ -2
TOP1P11387 AC004520.1-201ENST00000608362 1413 ntBASIC2.53□□□□□ -2
TOP1P11387 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.53□□□□□ -2
TOP1P11387 Y_RNA.169-201ENST00000363745 96 ntBASIC2.53□□□□□ -2
TOP1P11387 SNORA64-201ENST00000384674 134 ntBASIC2.53□□□□□ -2
TOP1P11387 SNORA48.3-201ENST00000391081 134 ntBASIC2.53□□□□□ -2
TOP1P11387 USP9YP26-201ENST00000421008 661 ntBASIC2.53□□□□□ -2
TOP1P11387 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.53□□□□□ -2
TOP1P11387 AL022400.1-201ENST00000423946 935 ntBASIC2.53□□□□□ -2
TOP1P11387 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.53□□□□□ -2
TOP1P11387 USP9YP10-201ENST00000454868 628 ntBASIC2.53□□□□□ -2
TOP1P11387 RPL12P25-201ENST00000455592 494 ntBASIC2.53□□□□□ -2
TOP1P11387 RNU7-125P-201ENST00000458760 62 ntBASIC2.53□□□□□ -2
TOP1P11387 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.53□□□□□ -2
TOP1P11387 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.53□□□□□ -2
TOP1P11387 AC023141.11-201ENST00000508864 202 ntBASIC2.53□□□□□ -2
TOP1P11387 AC093281.2-201ENST00000510153 597 ntBASIC2.53□□□□□ -2
TOP1P11387 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.53□□□□□ -2
TOP1P11387 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.53□□□□□ -2
TOP1P11387 HMGN1P28-201ENST00000521340 364 ntBASIC2.53□□□□□ -2
TOP1P11387 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.53□□□□□ -2
TOP1P11387 AC007834.2-201ENST00000536310 343 ntBASIC2.53□□□□□ -2
TOP1P11387 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.53□□□□□ -2
TOP1P11387 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.53□□□□□ -2
TOP1P11387 AL359212.1-201ENST00000556608 614 ntBASIC2.53□□□□□ -2
TOP1P11387 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.53□□□□□ -2
TOP1P11387 ISCA1P3-201ENST00000577104 373 ntBASIC2.53□□□□□ -2
TOP1P11387 AC002545.1-201ENST00000592511 181 ntBASIC2.53□□□□□ -2
TOP1P11387 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.53□□□□□ -2
TOP1P11387 AC072039.2-201ENST00000608883 439 ntBASIC2.53□□□□□ -2
TOP1P11387 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.53□□□□□ -2
TOP1P11387 AC009268.2-201ENST00000621925 457 ntBASIC2.53□□□□□ -2
TOP1P11387 MIR203B-201ENST00000636080 86 ntBASIC2.53□□□□□ -2
TOP1P11387 AC007671.2-201ENST00000637344 619 ntBASIC2.53□□□□□ -2
TOP1P11387 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
TOP1P11387 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.53□□□□□ -2
TOP1P11387 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
TOP1P11387 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.52□□□□□ -2.01
TOP1P11387 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TOP1P11387 RNU6-777P-201ENST00000364265 104 ntBASIC2.52□□□□□ -2.01
TOP1P11387 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TOP1P11387 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.52□□□□□ -2.01
TOP1P11387 SNORD116-8-201ENST00000384365 95 ntBASIC2.52□□□□□ -2.01
TOP1P11387 RNU6-754P-201ENST00000391166 107 ntBASIC2.52□□□□□ -2.01
TOP1P11387 CCNG1P1-201ENST00000406783 885 ntBASIC2.52□□□□□ -2.01
TOP1P11387 RN7SKP32-201ENST00000410167 303 ntBASIC2.52□□□□□ -2.01
TOP1P11387 MTND1P21-201ENST00000412991 285 ntBASIC2.52□□□□□ -2.01
TOP1P11387 NPM1P11-201ENST00000417106 855 ntBASIC2.52□□□□□ -2.01
TOP1P11387 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.52□□□□□ -2.01
TOP1P11387 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.52□□□□□ -2.01
TOP1P11387 AL451054.2-201ENST00000420896 202 ntBASIC2.52□□□□□ -2.01
TOP1P11387 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.52□□□□□ -2.01
TOP1P11387 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.52□□□□□ -2.01
TOP1P11387 AL117351.1-201ENST00000438864 766 ntBASIC2.52□□□□□ -2.01
TOP1P11387 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.52□□□□□ -2.01
TOP1P11387 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.52□□□□□ -2.01
TOP1P11387 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.52□□□□□ -2.01
TOP1P11387 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.52□□□□□ -2.01
TOP1P11387 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.52□□□□□ -2.01
TOP1P11387 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.52□□□□□ -2.01
TOP1P11387 RPS29P20-201ENST00000489592 171 ntBASIC2.52□□□□□ -2.01
TOP1P11387 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.52□□□□□ -2.01
TOP1P11387 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.52□□□□□ -2.01
TOP1P11387 OSBPL9P5-201ENST00000542581 171 ntBASIC2.52□□□□□ -2.01
TOP1P11387 AC007115.1-201ENST00000546853 234 ntBASIC2.52□□□□□ -2.01
TOP1P11387 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.52□□□□□ -2.01
TOP1P11387 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.52□□□□□ -2.01
TOP1P11387 AC002400.1-201ENST00000569310 726 ntBASIC2.52□□□□□ -2.01
TOP1P11387 MIR5571-201ENST00000577998 113 ntBASIC2.52□□□□□ -2.01
TOP1P11387 AP000403.1-201ENST00000603349 851 ntBASIC2.52□□□□□ -2.01
TOP1P11387 AL596327.1-201ENST00000603629 213 ntBASIC2.52□□□□□ -2.01
TOP1P11387 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.52□□□□□ -2.01
TOP1P11387 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.52□□□□□ -2.01
TOP1P11387 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
TOP1P11387 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TOP1P11387 DDX43P2-201ENST00000604753 1354 ntBASIC2.51□□□□□ -2.01
TOP1P11387 CKAP2P1-201ENST00000555477 2049 ntBASIC2.51□□□□□ -2.01
TOP1P11387 MIR1261-201ENST00000408659 82 ntBASIC2.51□□□□□ -2.01
TOP1P11387 RN7SKP284-201ENST00000411002 343 ntBASIC2.51□□□□□ -2.01
TOP1P11387 BPY2DP-201ENST00000422208 265 ntBASIC2.51□□□□□ -2.01
TOP1P11387 WARS2P1-201ENST00000429678 537 ntBASIC2.51□□□□□ -2.01
TOP1P11387 MED14P1-201ENST00000430517 648 ntBASIC2.51□□□□□ -2.01
TOP1P11387 Z98742.2-201ENST00000431564 187 ntBASIC2.51□□□□□ -2.01
TOP1P11387 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.51□□□□□ -2.01
TOP1P11387 AL513124.1-201ENST00000450410 614 ntBASIC2.51□□□□□ -2.01
TOP1P11387 OR6C5P-201ENST00000452388 923 ntBASIC2.51□□□□□ -2.01
TOP1P11387 RPL30P9-201ENST00000465586 330 ntBASIC2.51□□□□□ -2.01
TOP1P11387 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.51□□□□□ -2.01
TOP1P11387 AL160314.1-201ENST00000490836 438 ntBASIC2.51□□□□□ -2.01
TOP1P11387 GZMAP1-201ENST00000503054 631 ntBASIC2.51□□□□□ -2.01
TOP1P11387 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
TOP1P11387 RNU6-150P-201ENST00000516237 95 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms