Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNU6-583P-201ENST00000516012 92 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 RNA5SP290-201ENST00000517133 127 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AC118273.2-201ENST00000532092 465 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 MTCO2P15-201ENST00000532655 656 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 NACAP3-201ENST00000552100 481 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 MIR5708-201ENST00000579723 85 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AC091152.3-201ENST00000604227 325 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 TUG1_2.1-201ENST00000614234 87 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AC009268.2-201ENST00000621925 457 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 MIR7843-201ENST00000622274 79 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AC019226.1-201ENST00000625666 515 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 MIR3199-2-201ENST00000636243 86 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 RNU1-17P-201ENST00000363022 152 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AL590084.2-201ENST00000401481 382 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 RN7SKP158-201ENST00000410453 326 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC068533.2-201ENST00000411872 306 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 RPL26P27-201ENST00000414397 437 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AL161449.1-201ENST00000414531 1199 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC010153.1-201ENST00000432862 727 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 MTND1P28-201ENST00000435623 950 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 MTND4P6-201ENST00000438297 472 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 HMGN2P10-201ENST00000448085 265 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 BZW1P2-201ENST00000473537 826 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC021382.1-201ENST00000483523 359 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 RNU6-1225P-201ENST00000516336 65 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 OR8K2P-201ENST00000524645 927 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC006199.1-201ENST00000548728 219 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 CYB5AP5-201ENST00000549779 389 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC012435.1-202ENST00000568772 240 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 MIR4765-201ENST00000585007 77 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AP001269.3-201ENST00000588718 329 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC005776.1-201ENST00000603164 290 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC069545.1-201ENST00000605671 358 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC068276.1-201ENST00000605793 379 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 uc_338.5-201ENST00000611839 155 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC008759.3-201ENST00000613300 508 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC023158.2-201ENST00000614876 543 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC109809.1-201ENST00000619665 545 ntBASIC1.55□□□□□ -2.16
HLA-DQB2P05538 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.55□□□□□ -2.16
HLA-DQB2P05538 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 RNU6-97P-201ENST00000363387 104 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 RNU6-1207P-201ENST00000384343 107 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 TXNP7-201ENST00000406296 293 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 MTND1P21-201ENST00000412991 285 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 MTCYBP38-201ENST00000417160 1123 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 XKRYP1-201ENST00000423438 492 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 C1DP1-201ENST00000426049 402 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AL445669.1-201ENST00000426743 755 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 XKRYP2-201ENST00000432915 492 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 FABP5P14-201ENST00000437273 393 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 BTBD7P2-201ENST00000441962 620 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 RPL18AP17-201ENST00000455326 198 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AC013267.1-201ENST00000458227 267 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 snoU13.23-201ENST00000458863 104 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AC093801.2-201ENST00000503966 1050 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 RNU6-927P-201ENST00000516199 100 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AC104417.1-201ENST00000523974 751 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 CYCSP2-201ENST00000558168 301 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AC021739.1-201ENST00000559631 174 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AL109918.3-201ENST00000603072 338 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 uc_338.14-201ENST00000613162 166 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AC009233.1-201ENST00000616477 371 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms