Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC023141.4-201ENST00000412031 328 ntBASIC1.93□□□□□ -2.1
CD74P04233 AC011233.1-201ENST00000422812 283 ntBASIC1.93□□□□□ -2.1
CD74P04233 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.93□□□□□ -2.1
CD74P04233 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.93□□□□□ -2.1
CD74P04233 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.93□□□□□ -2.1
CD74P04233 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.93□□□□□ -2.1
CD74P04233 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.93□□□□□ -2.1
CD74P04233 AC108938.1-201ENST00000451204 136 ntBASIC1.93□□□□□ -2.1
CD74P04233 SNORD109B-201ENST00000458961 67 ntBASIC1.93□□□□□ -2.1
CD74P04233 SNORD109A-201ENST00000459128 67 ntBASIC1.93□□□□□ -2.1
CD74P04233 MRPS17P3-201ENST00000465453 385 ntBASIC1.93□□□□□ -2.1
CD74P04233 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.93□□□□□ -2.1
CD74P04233 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CD74P04233 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.93□□□□□ -2.1
CD74P04233 AC025755.1-201ENST00000521306 278 ntBASIC1.93□□□□□ -2.1
CD74P04233 AP005902.1-201ENST00000521358 186 ntBASIC1.93□□□□□ -2.1
CD74P04233 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CD74P04233 AC012435.1-202ENST00000568772 240 ntBASIC1.93□□□□□ -2.1
CD74P04233 SNORD53-201ENST00000579969 78 ntBASIC1.93□□□□□ -2.1
CD74P04233 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.93□□□□□ -2.1
CD74P04233 MIR5007-201ENST00000583098 95 ntBASIC1.93□□□□□ -2.1
CD74P04233 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.93□□□□□ -2.1
CD74P04233 AC078899.2-201ENST00000595282 212 ntBASIC1.93□□□□□ -2.1
CD74P04233 AP001981.2-201ENST00000603241 418 ntBASIC1.93□□□□□ -2.1
CD74P04233 AC103710.1-201ENST00000610003 901 ntBASIC1.93□□□□□ -2.1
CD74P04233 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.93□□□□□ -2.1
CD74P04233 AL031601.2-202ENST00000622650 282 ntBASIC1.93□□□□□ -2.1
CD74P04233 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CD74P04233 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CD74P04233 AC080128.1-201ENST00000474389 1917 ntBASIC1.92□□□□□ -2.1
CD74P04233 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CD74P04233 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CD74P04233 RNU6-809P-201ENST00000384461 107 ntBASIC1.92□□□□□ -2.1
CD74P04233 RNU6-750P-201ENST00000390946 107 ntBASIC1.92□□□□□ -2.1
CD74P04233 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.92□□□□□ -2.1
CD74P04233 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.92□□□□□ -2.1
CD74P04233 NPM1P11-201ENST00000417106 855 ntBASIC1.92□□□□□ -2.1
CD74P04233 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.92□□□□□ -2.1
CD74P04233 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.92□□□□□ -2.1
CD74P04233 XKRYP1-201ENST00000423438 492 ntBASIC1.92□□□□□ -2.1
CD74P04233 HMGN2P38-201ENST00000423806 265 ntBASIC1.92□□□□□ -2.1
CD74P04233 AC010099.3-201ENST00000423896 409 ntBASIC1.92□□□□□ -2.1
CD74P04233 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CD74P04233 AC244035.1-201ENST00000430042 390 ntBASIC1.92□□□□□ -2.1
CD74P04233 XKRYP2-201ENST00000432915 492 ntBASIC1.92□□□□□ -2.1
CD74P04233 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.92□□□□□ -2.1
CD74P04233 RPS15AP28-201ENST00000435088 386 ntBASIC1.92□□□□□ -2.1
CD74P04233 AC020550.1-201ENST00000447385 163 ntBASIC1.92□□□□□ -2.1
CD74P04233 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CD74P04233 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.92□□□□□ -2.1
CD74P04233 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
CD74P04233 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.92□□□□□ -2.1
CD74P04233 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.92□□□□□ -2.1
CD74P04233 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.92□□□□□ -2.1
CD74P04233 AL160314.1-201ENST00000490836 438 ntBASIC1.92□□□□□ -2.1
CD74P04233 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CD74P04233 AC010486.1-201ENST00000511793 424 ntBASIC1.92□□□□□ -2.1
CD74P04233 SNORA3.4-201ENST00000515969 96 ntBASIC1.92□□□□□ -2.1
CD74P04233 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.92□□□□□ -2.1
CD74P04233 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.92□□□□□ -2.1
CD74P04233 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.92□□□□□ -2.1
CD74P04233 AC022022.2-201ENST00000602989 360 ntBASIC1.92□□□□□ -2.1
CD74P04233 FTX_3.1-201ENST00000610451 147 ntBASIC1.92□□□□□ -2.1
CD74P04233 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.92□□□□□ -2.1
CD74P04233 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.91□□□□□ -2.1
CD74P04233 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CD74P04233 RNU5A-8P-201ENST00000364102 114 ntBASIC1.91□□□□□ -2.1
CD74P04233 RNU4-52P-201ENST00000384209 138 ntBASIC1.91□□□□□ -2.1
CD74P04233 MIR34A-201ENST00000385130 110 ntBASIC1.91□□□□□ -2.1
CD74P04233 AL359634.1-202ENST00000404721 284 ntBASIC1.91□□□□□ -2.1
CD74P04233 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.91□□□□□ -2.1
CD74P04233 USP9YP26-201ENST00000421008 661 ntBASIC1.91□□□□□ -2.1
CD74P04233 RPS15AP5-201ENST00000436276 388 ntBASIC1.91□□□□□ -2.1
CD74P04233 AC018634.1-201ENST00000437554 401 ntBASIC1.91□□□□□ -2.1
CD74P04233 AC005094.1-201ENST00000440420 368 ntBASIC1.91□□□□□ -2.1
CD74P04233 AL606662.1-201ENST00000445763 553 ntBASIC1.91□□□□□ -2.1
CD74P04233 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CD74P04233 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.91□□□□□ -2.1
CD74P04233 CECR9-201ENST00000453421 199 ntBASIC1.91□□□□□ -2.1
CD74P04233 RN7SL429P-201ENST00000479090 223 ntBASIC1.91□□□□□ -2.1
CD74P04233 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.91□□□□□ -2.1
CD74P04233 MTND2P14-201ENST00000482139 351 ntBASIC1.91□□□□□ -2.1
CD74P04233 RN7SL489P-201ENST00000486185 223 ntBASIC1.91□□□□□ -2.1
CD74P04233 RPS27P21-201ENST00000486977 252 ntBASIC1.91□□□□□ -2.1
CD74P04233 RN7SL327P-201ENST00000488659 223 ntBASIC1.91□□□□□ -2.1
CD74P04233 AC105252.1-201ENST00000503089 286 ntBASIC1.91□□□□□ -2.1
CD74P04233 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.91□□□□□ -2.1
CD74P04233 AF131216.2-201ENST00000512316 564 ntBASIC1.91□□□□□ -2.1
CD74P04233 SCARNA17.1-201ENST00000516211 143 ntBASIC1.91□□□□□ -2.1
CD74P04233 SCARNA17.2-201ENST00000516334 143 ntBASIC1.91□□□□□ -2.1
CD74P04233 DEFB108A-201ENST00000530110 222 ntBASIC1.91□□□□□ -2.1
CD74P04233 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CD74P04233 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.91□□□□□ -2.1
CD74P04233 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.91□□□□□ -2.1
CD74P04233 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.91□□□□□ -2.1
CD74P04233 MIR5571-201ENST00000577998 113 ntBASIC1.91□□□□□ -2.1
CD74P04233 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CD74P04233 AP001004.1-201ENST00000582468 324 ntBASIC1.91□□□□□ -2.1
CD74P04233 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.91□□□□□ -2.1
CD74P04233 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms