Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 TTC39CP1-201ENST00000512513 755 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.79□□□□□ -1.8
COL3A1P02461 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.79□□□□□ -1.8
COL3A1P02461 POLR3GP2-201ENST00000588366 668 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 RNU6-89P-201ENST00000606519 100 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AC079597.1-201ENST00000624306 508 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AL137790.1-201ENST00000634283 177 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AL133216.2-202ENST00000634512 349 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL3A1P02461 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.79□□□□□ -1.8
COL3A1P02461 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL3A1P02461 RN7SKP44-201ENST00000363602 316 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 Y_RNA.231-201ENST00000364358 102 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AC117470.1-201ENST00000381974 330 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 SNORD116-29-201ENST00000384516 83 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 RNU6-831P-201ENST00000384548 107 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 RNU6-606P-201ENST00000384721 111 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AL031679.1-201ENST00000400616 525 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 MTCYBP4-201ENST00000401524 249 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 Y_RNA.615-201ENST00000410769 117 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 Y_RNA.618-201ENST00000410949 107 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.79□□□□□ -1.8
COL3A1P02461 AL139281.1-201ENST00000422120 335 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.79□□□□□ -1.8
COL3A1P02461 RPL23AP30-201ENST00000432419 501 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 SNRPEP4-201ENST00000435815 279 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AL031663.1-201ENST00000437445 219 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 CBX1P4-201ENST00000439415 457 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 Z98949.2-201ENST00000440996 144 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AL035551.1-201ENST00000446931 348 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AC002381.1-201ENST00000447049 280 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AP1S2P1-201ENST00000457344 379 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 RNU7-152P-201ENST00000458982 64 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AC026410.2-201ENST00000460281 156 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 RPL23AP14-201ENST00000468281 468 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 KC877373.1-201ENST00000479066 408 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AC090525.1-201ENST00000479116 478 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.79□□□□□ -1.8
COL3A1P02461 RNU6-410P-201ENST00000517006 107 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.79□□□□□ -1.8
COL3A1P02461 OR5BN1P-201ENST00000532955 829 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.79□□□□□ -1.8
COL3A1P02461 OR4T1P-201ENST00000554933 911 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.79□□□□□ -1.8
COL3A1P02461 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.79□□□□□ -1.8
COL3A1P02461 MAGOH2P-202ENST00000584384 429 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL3A1P02461 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.79□□□□□ -1.8
COL3A1P02461 U6.101-201ENST00000637707 76 ntBASIC3.79□□□□□ -1.8
COL3A1P02461 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL3A1P02461 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
COL3A1P02461 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL3A1P02461 AC092125.1-201ENST00000562568 1995 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.78□□□□□ -1.8
COL3A1P02461 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL3A1P02461 Y_RNA.28-201ENST00000362554 111 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 RNU6-7-201ENST00000364784 107 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 RNU6-8-201ENST00000365467 107 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 RNU6-744P-201ENST00000365557 107 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 Y_RNA.373-201ENST00000365600 103 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 RNU6-1316P-201ENST00000384242 108 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 MT-TG-201ENST00000387429 68 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 RNY4P36-201ENST00000391116 96 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 AL592114.1-201ENST00000403842 483 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 AC006548.1-201ENST00000427470 102 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.78□□□□□ -1.8
COL3A1P02461 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.78□□□□□ -1.8
COL3A1P02461 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.78□□□□□ -1.8
COL3A1P02461 BTF3P15-201ENST00000455606 336 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 MTND4P17-201ENST00000470444 350 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.78□□□□□ -1.8
COL3A1P02461 AP004217.1-201ENST00000480579 346 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 AC090453.1-201ENST00000495560 436 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 SUMO2P4-201ENST00000504193 276 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 AC091885.1-201ENST00000506658 268 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 AC114797.1-201ENST00000514003 728 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 AC104986.1-201ENST00000517978 436 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 AL117187.1-201ENST00000555482 181 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.78□□□□□ -1.8
COL3A1P02461 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.78□□□□□ -1.8
COL3A1P02461 MIR7106-201ENST00000612419 65 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
COL3A1P02461 uc_338.22-201ENST00000622722 187 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 AL359757.2-201ENST00000624309 274 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 CR381572.1-201ENST00000625098 102 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
COL3A1P02461 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL3A1P02461 ASNSP3-201ENST00000451989 1306 ntBASIC3.78□□□□□ -1.8
COL3A1P02461 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
COL3A1P02461 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.81
COL3A1P02461 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.77□□□□□ -1.81
COL3A1P02461 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL3A1P02461 RNU1-112P-201ENST00000364401 164 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 SNORA70E-201ENST00000384492 135 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 MIR568-201ENST00000385036 95 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 AL359634.1-202ENST00000404721 284 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.77□□□□□ -1.81
COL3A1P02461 RPL21P40-201ENST00000428586 483 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 AC010881.1-201ENST00000433830 235 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms