Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC233702.2-202ENST00000562547 291 ntBASIC1.01□□□□□ -2.25
TNFP01375 RN7SL622P-201ENST00000585292 275 ntBASIC1.01□□□□□ -2.25
TNFP01375 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.01□□□□□ -2.25
TNFP01375 MFSD8-213ENST00000641134 1327 ntBASIC1□□□□□ -2.25
TNFP01375 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1□□□□□ -2.25
TNFP01375 Y_RNA.122-201ENST00000363331 96 ntBASIC1□□□□□ -2.25
TNFP01375 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
TNFP01375 RNU6-939P-201ENST00000384634 107 ntBASIC1□□□□□ -2.25
TNFP01375 MIR30A-201ENST00000385092 71 ntBASIC1□□□□□ -2.25
TNFP01375 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
TNFP01375 RNU2-41P-201ENST00000410991 178 ntBASIC1□□□□□ -2.25
TNFP01375 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1□□□□□ -2.25
TNFP01375 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1□□□□□ -2.25
TNFP01375 MTND1P18-201ENST00000448191 573 ntBASIC1□□□□□ -2.25
TNFP01375 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1□□□□□ -2.25
TNFP01375 AP1S2P1-201ENST00000457344 379 ntBASIC1□□□□□ -2.25
TNFP01375 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1□□□□□ -2.25
TNFP01375 AC092902.1-201ENST00000486999 259 ntBASIC1□□□□□ -2.25
TNFP01375 AC034244.1-201ENST00000507687 207 ntBASIC1□□□□□ -2.25
TNFP01375 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1□□□□□ -2.25
TNFP01375 SNORA31.16-201ENST00000516773 139 ntBASIC1□□□□□ -2.25
TNFP01375 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1□□□□□ -2.25
TNFP01375 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1□□□□□ -2.25
TNFP01375 LSM6P2-201ENST00000552208 177 ntBASIC1□□□□□ -2.25
TNFP01375 MIR4765-201ENST00000585007 77 ntBASIC1□□□□□ -2.25
TNFP01375 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1□□□□□ -2.25
TNFP01375 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1□□□□□ -2.25
TNFP01375 AL078603.1-201ENST00000603824 313 ntBASIC1□□□□□ -2.25
TNFP01375 SUMO2P14-201ENST00000604488 293 ntBASIC1□□□□□ -2.25
TNFP01375 AP003973.1-201ENST00000604639 691 ntBASIC1□□□□□ -2.25
TNFP01375 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1□□□□□ -2.25
TNFP01375 AC009318.4-201ENST00000620496 486 ntBASIC1□□□□□ -2.25
TNFP01375 AC017104.5-201ENST00000637647 639 ntBASIC1□□□□□ -2.25
TNFP01375 AC010889.1-201ENST00000566193 2666 ntBASIC1□□□□□ -2.25
TNFP01375 MTND5P31-201ENST00000419366 1374 ntBASIC0.99□□□□□ -2.25
TNFP01375 RNU5A-1-201ENST00000362698 116 ntBASIC0.99□□□□□ -2.25
TNFP01375 Y_RNA.355-201ENST00000365462 98 ntBASIC0.99□□□□□ -2.25
TNFP01375 SNORA18.2-201ENST00000383865 132 ntBASIC0.99□□□□□ -2.25
TNFP01375 SNORD26-201ENST00000384147 75 ntBASIC0.99□□□□□ -2.25
TNFP01375 RNU6-921P-201ENST00000384361 107 ntBASIC0.99□□□□□ -2.25
TNFP01375 MIR520E-201ENST00000384867 87 ntBASIC0.99□□□□□ -2.25
TNFP01375 MED14P1-201ENST00000430517 648 ntBASIC0.99□□□□□ -2.25
TNFP01375 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.99□□□□□ -2.25
TNFP01375 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.99□□□□□ -2.25
TNFP01375 AC068135.1-201ENST00000446164 246 ntBASIC0.99□□□□□ -2.25
TNFP01375 RPS29P28-201ENST00000446439 141 ntBASIC0.99□□□□□ -2.25
TNFP01375 RPL26P9-201ENST00000457466 433 ntBASIC0.99□□□□□ -2.25
TNFP01375 RPL30P12-201ENST00000474666 353 ntBASIC0.99□□□□□ -2.25
TNFP01375 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.99□□□□□ -2.25
TNFP01375 ARL2BPP4-201ENST00000506854 471 ntBASIC0.99□□□□□ -2.25
TNFP01375 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.99□□□□□ -2.25
TNFP01375 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.99□□□□□ -2.25
TNFP01375 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.99□□□□□ -2.25
TNFP01375 FAM106DP-201ENST00000586416 501 ntBASIC0.99□□□□□ -2.25
TNFP01375 AL022067.1-201ENST00000602426 454 ntBASIC0.99□□□□□ -2.25
TNFP01375 AC024595.1-201ENST00000623088 387 ntBASIC0.99□□□□□ -2.25
TNFP01375 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.99□□□□□ -2.25
TNFP01375 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.99□□□□□ -2.25
TNFP01375 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
TNFP01375 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
TNFP01375 SNORD14B-201ENST00000364533 90 ntBASIC0.98□□□□□ -2.25
TNFP01375 Y_RNA.508-201ENST00000384502 114 ntBASIC0.98□□□□□ -2.25
TNFP01375 HMGB1P17-201ENST00000403495 628 ntBASIC0.98□□□□□ -2.25
TNFP01375 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.98□□□□□ -2.25
TNFP01375 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.98□□□□□ -2.25
TNFP01375 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.98□□□□□ -2.25
TNFP01375 PTENP1-201ENST00000447117 1215 ntBASIC0.98□□□□□ -2.25
TNFP01375 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.98□□□□□ -2.25
TNFP01375 RNA5SP220-201ENST00000516298 104 ntBASIC0.98□□□□□ -2.25
TNFP01375 AC034114.1-201ENST00000520293 285 ntBASIC0.98□□□□□ -2.25
TNFP01375 AP004247.1-201ENST00000531556 1289 ntBASIC0.98□□□□□ -2.25
TNFP01375 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.98□□□□□ -2.25
TNFP01375 SNORA4-201ENST00000584302 138 ntBASIC0.98□□□□□ -2.25
TNFP01375 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.98□□□□□ -2.25
TNFP01375 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.98□□□□□ -2.25
TNFP01375 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.98□□□□□ -2.25
TNFP01375 MIR6130-201ENST00000619419 109 ntBASIC0.98□□□□□ -2.25
TNFP01375 AL356585.4-201ENST00000623078 1229 ntBASIC0.98□□□□□ -2.25
TNFP01375 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.98□□□□□ -2.25
TNFP01375 AP000776.1-201ENST00000530032 1663 ntBASIC0.97□□□□□ -2.25
TNFP01375 RNU6-251P-201ENST00000363235 104 ntBASIC0.97□□□□□ -2.25
TNFP01375 AC092648.1-201ENST00000425870 423 ntBASIC0.97□□□□□ -2.25
TNFP01375 MTND2P29-201ENST00000438595 412 ntBASIC0.97□□□□□ -2.25
TNFP01375 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.97□□□□□ -2.25
TNFP01375 AC092685.1-201ENST00000447960 1243 ntBASIC0.97□□□□□ -2.25
TNFP01375 LARP1BP2-201ENST00000486594 519 ntBASIC0.97□□□□□ -2.25
TNFP01375 AC132942.1-201ENST00000486753 483 ntBASIC0.97□□□□□ -2.25
TNFP01375 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.97□□□□□ -2.25
TNFP01375 AC113420.1-201ENST00000507903 571 ntBASIC0.97□□□□□ -2.25
TNFP01375 MRPS33P3-201ENST00000513456 322 ntBASIC0.97□□□□□ -2.25
TNFP01375 RN7SKP265-201ENST00000516448 223 ntBASIC0.97□□□□□ -2.25
TNFP01375 OR5AK1P-201ENST00000524837 922 ntBASIC0.97□□□□□ -2.25
TNFP01375 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.97□□□□□ -2.25
TNFP01375 AC007151.1-201ENST00000572774 483 ntBASIC0.97□□□□□ -2.25
TNFP01375 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.97□□□□□ -2.25
TNFP01375 AL050343.2-201ENST00000607338 280 ntBASIC0.97□□□□□ -2.25
TNFP01375 AP000238.1-201ENST00000608759 426 ntBASIC0.97□□□□□ -2.25
TNFP01375 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.97□□□□□ -2.25
TNFP01375 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.97□□□□□ -2.25
TNFP01375 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms