Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 U1.23-201ENST00000610293 146 ntBASIC3.17□□□□□ -1.9
LDLRP01130 RNU1-68P-201ENST00000615382 146 ntBASIC3.17□□□□□ -1.9
LDLRP01130 SNHG22-203ENST00000617833 660 ntBASIC3.17□□□□□ -1.9
LDLRP01130 U1.39-201ENST00000621562 146 ntBASIC3.17□□□□□ -1.9
LDLRP01130 U4.6-201ENST00000621618 127 ntBASIC3.17□□□□□ -1.9
LDLRP01130 AC009033.1-201ENST00000624279 431 ntBASIC3.17□□□□□ -1.9
LDLRP01130 MIR4275-201ENST00000636486 87 ntBASIC3.17□□□□□ -1.9
LDLRP01130 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LDLRP01130 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LDLRP01130 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LDLRP01130 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LDLRP01130 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.16□□□□□ -1.9
LDLRP01130 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LDLRP01130 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
LDLRP01130 Y_RNA.1-201ENST00000352915 104 ntBASIC3.16□□□□□ -1.9
LDLRP01130 Y_RNA.279-201ENST00000364763 95 ntBASIC3.16□□□□□ -1.9
LDLRP01130 MIR514A1-201ENST00000385133 98 ntBASIC3.16□□□□□ -1.9
LDLRP01130 MIR493-201ENST00000385254 89 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AL356776.1-201ENST00000406574 447 ntBASIC3.16□□□□□ -1.9
LDLRP01130 RNU2-36P-201ENST00000410361 191 ntBASIC3.16□□□□□ -1.9
LDLRP01130 MRPL50P2-201ENST00000416821 482 ntBASIC3.16□□□□□ -1.9
LDLRP01130 HSPE1P1-201ENST00000421494 318 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.16□□□□□ -1.9
LDLRP01130 AC137499.1-201ENST00000427602 88 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.16□□□□□ -1.9
LDLRP01130 AC022364.2-201ENST00000457963 554 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.16□□□□□ -1.9
LDLRP01130 HMGN1P10-201ENST00000474557 553 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.16□□□□□ -1.9
LDLRP01130 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.16□□□□□ -1.9
LDLRP01130 AC096576.1-201ENST00000489014 359 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AC079382.1-201ENST00000493346 557 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AC018710.1-201ENST00000506509 158 ntBASIC3.16□□□□□ -1.9
LDLRP01130 SCARNA15.1-201ENST00000516384 125 ntBASIC3.16□□□□□ -1.9
LDLRP01130 SCARNA20.6-201ENST00000517251 106 ntBASIC3.16□□□□□ -1.9
LDLRP01130 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AC022616.3-201ENST00000523940 148 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AF235103.2-201ENST00000525753 346 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AL355836.1-201ENST00000555951 870 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AC025678.1-201ENST00000567861 338 ntBASIC3.16□□□□□ -1.9
LDLRP01130 MIR5004-201ENST00000579078 107 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AC067852.3-201ENST00000589177 561 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AC005261.5-201ENST00000596280 355 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AC245014.2-201ENST00000603689 287 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AL136363.1-201ENST00000605349 337 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AC246785.4-201ENST00000605374 287 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AL162274.2-201ENST00000614406 332 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AC126177.8-201ENST00000618339 1015 ntBASIC3.16□□□□□ -1.9
LDLRP01130 AL136221.1-201ENST00000621449 509 ntBASIC3.16□□□□□ -1.9
LDLRP01130 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LDLRP01130 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LDLRP01130 AC233263.6-201ENST00000631132 1963 ntBASIC3.16□□□□□ -1.9
LDLRP01130 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LDLRP01130 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.9
LDLRP01130 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LDLRP01130 SNORD56.2-201ENST00000363242 71 ntBASIC3.15□□□□□ -1.91
LDLRP01130 SNORA80A-201ENST00000363922 136 ntBASIC3.15□□□□□ -1.91
LDLRP01130 RNU6-116P-201ENST00000384042 109 ntBASIC3.15□□□□□ -1.91
LDLRP01130 Y_RNA.573-201ENST00000384763 105 ntBASIC3.15□□□□□ -1.91
LDLRP01130 RPL21P3-201ENST00000395517 478 ntBASIC3.15□□□□□ -1.91
LDLRP01130 UBE2V1P2-201ENST00000397758 440 ntBASIC3.15□□□□□ -1.91
LDLRP01130 RN7SKP140-201ENST00000411196 284 ntBASIC3.15□□□□□ -1.91
LDLRP01130 BX323014.1-201ENST00000412876 237 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.15□□□□□ -1.91
LDLRP01130 DBIP2-201ENST00000419076 262 ntBASIC3.15□□□□□ -1.91
LDLRP01130 PIGFP2-201ENST00000421400 651 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AL353193.1-201ENST00000421444 268 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.15□□□□□ -1.91
LDLRP01130 RPL27AP8-201ENST00000424277 446 ntBASIC3.15□□□□□ -1.91
LDLRP01130 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.15□□□□□ -1.91
LDLRP01130 AC093106.2-201ENST00000428212 385 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.15□□□□□ -1.91
LDLRP01130 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.15□□□□□ -1.91
LDLRP01130 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AC016696.1-201ENST00000446949 318 ntBASIC3.15□□□□□ -1.91
LDLRP01130 GAPDHP27-201ENST00000447427 1020 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.15□□□□□ -1.91
LDLRP01130 SNRPGP6-201ENST00000451124 220 ntBASIC3.15□□□□□ -1.91
LDLRP01130 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.15□□□□□ -1.91
LDLRP01130 C1DP4-201ENST00000455429 424 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.15□□□□□ -1.91
LDLRP01130 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.15□□□□□ -1.91
LDLRP01130 PMCHL2-203ENST00000457791 237 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AC146507.2-201ENST00000460608 476 ntBASIC3.15□□□□□ -1.91
LDLRP01130 MTCO2P29-201ENST00000465212 189 ntBASIC3.15□□□□□ -1.91
LDLRP01130 RPL27AP5-201ENST00000469428 449 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AC092185.1-201ENST00000491371 97 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.15□□□□□ -1.91
LDLRP01130 AP001804.3-201ENST00000525146 880 ntBASIC3.15□□□□□ -1.91
LDLRP01130 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LDLRP01130 AC011979.2-201ENST00000527568 352 ntBASIC3.15□□□□□ -1.91
LDLRP01130 OR5AL2P-201ENST00000532185 920 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.15□□□□□ -1.91
LDLRP01130 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.15□□□□□ -1.91
LDLRP01130 AC093012.1-202ENST00000549403 582 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AL512360.1-201ENST00000555346 234 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.15□□□□□ -1.91
LDLRP01130 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.15□□□□□ -1.91
LDLRP01130 DPPA3P3-201ENST00000603842 430 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AC007363.1-201ENST00000604736 620 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms