Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RNU6-8-201ENST00000365467 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-25P-201ENST00000383873 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-1-201ENST00000383898 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 Y_RNA.428-201ENST00000384078 102 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-1032P-201ENST00000384100 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-48P-201ENST00000384161 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-36P-201ENST00000384172 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-4P-201ENST00000384205 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-5P-201ENST00000384238 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-3P-201ENST00000384314 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-16P-201ENST00000384385 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-15P-201ENST00000384534 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-2-201ENST00000384627 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-29P-201ENST00000384637 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-9-201ENST00000384776 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-33P-201ENST00000384793 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 MRPL42P3-201ENST00000401492 326 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 MIR1179-201ENST00000408703 91 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RN7SKP177-201ENST00000410567 355 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU2-71P-201ENST00000411395 189 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 AL096701.2-201ENST00000416920 238 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF40AO75400 PGBD4P6-201ENST00000421501 610 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 AL133396.1-201ENST00000432048 687 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 AC011998.1-201ENST00000433403 117 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.82□□□□□ -1.64
PRPF40AO75400 Z82210.1-201ENST00000440037 231 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 AL356535.1-201ENST00000440335 398 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RPL21P23-201ENST00000446654 460 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 FTH1P25-201ENST00000447665 469 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 NDUFB1P2-201ENST00000449477 176 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RPS29P19-201ENST00000479709 171 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF40AO75400 AC093840.1-201ENST00000511599 336 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 ACA59.1-201ENST00000515966 143 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 SNORA31.19-201ENST00000517079 126 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 IGLVIV-65-201ENST00000517313 360 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.82□□□□□ -1.64
PRPF40AO75400 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF40AO75400 AC010653.1-201ENST00000571108 881 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 AC093227.2-201ENST00000589357 285 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 AC020914.4-201ENST00000597690 277 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-6P-201ENST00000606623 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.82□□□□□ -1.64
PRPF40AO75400 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF40AO75400 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.82□□□□□ -1.64
PRPF40AO75400 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.82□□□□□ -1.64
PRPF40AO75400 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF40AO75400 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.82□□□□□ -1.64
PRPF40AO75400 USP8P1-201ENST00000494673 3183 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF40AO75400 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF40AO75400 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.81□□□□□ -1.64
PRPF40AO75400 Y_RNA.158-201ENST00000363651 101 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 RNU6-842P-201ENST00000384269 107 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 MIR10A-201ENST00000385043 110 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 MIR34A-201ENST00000385130 110 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 MIR493-201ENST00000385254 89 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 AL356057.3-201ENST00000402607 340 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 RNU6-325P-201ENST00000411132 105 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 RAC1P3-201ENST00000416129 580 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 RSL24D1P6-201ENST00000426934 401 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.81□□□□□ -1.64
PRPF40AO75400 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.81□□□□□ -1.64
PRPF40AO75400 RPS23P7-201ENST00000466210 444 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.81□□□□□ -1.64
PRPF40AO75400 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.81□□□□□ -1.64
PRPF40AO75400 AC113155.1-201ENST00000511141 769 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 SNORD116.3-201ENST00000517176 78 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 AP004242.1-201ENST00000533701 349 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.81□□□□□ -1.64
PRPF40AO75400 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.81□□□□□ -1.64
PRPF40AO75400 MIR4680-201ENST00000580906 66 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 MIR4697-201ENST00000582977 78 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 AL645944.1-201ENST00000603857 493 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 AP000787.2-201ENST00000604432 568 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 AL121917.1-203ENST00000605534 577 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 AC083809.1-201ENST00000615051 472 ntBASIC4.81□□□□□ -1.64
PRPF40AO75400 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.81□□□□□ -1.64
PRPF40AO75400 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PRPF40AO75400 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PRPF40AO75400 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.81□□□□□ -1.64
PRPF40AO75400 ZNF807-201ENST00000328088 1707 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 Z82217.1-201ENST00000625157 8149 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 FAM35DP-201ENST00000323387 2712 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.8□□□□□ -1.64
PRPF40AO75400 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF40AO75400 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.8□□□□□ -1.64
PRPF40AO75400 SNORA31-201ENST00000362607 130 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF40AO75400 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF40AO75400 RNU1-89P-201ENST00000384592 164 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 SNORA41-201ENST00000384675 132 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 PPIAP31-201ENST00000405422 495 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 SNORA11F-201ENST00000408237 128 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 AC096664.2-201ENST00000411843 406 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.8□□□□□ -1.64
PRPF40AO75400 AL157831.1-201ENST00000426134 473 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms