Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC106782.4-201ENST00000568264 210 ntBASIC2.99□□□□□ -1.93
LMX1BO60663 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.99□□□□□ -1.93
LMX1BO60663 AC010928.3-201ENST00000587712 541 ntBASIC2.99□□□□□ -1.93
LMX1BO60663 BNIP3P25-201ENST00000596023 559 ntBASIC2.99□□□□□ -1.93
LMX1BO60663 XIAPP1-201ENST00000603162 600 ntBASIC2.99□□□□□ -1.93
LMX1BO60663 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.99□□□□□ -1.93
LMX1BO60663 AC130324.3-201ENST00000614165 542 ntBASIC2.99□□□□□ -1.93
LMX1BO60663 FRG1KP-201ENST00000623592 341 ntBASIC2.99□□□□□ -1.93
LMX1BO60663 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.99□□□□□ -1.93
LMX1BO60663 MTND1P37-201ENST00000636562 264 ntBASIC2.99□□□□□ -1.93
LMX1BO60663 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LMX1BO60663 AC058791.1-201ENST00000608412 3198 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
LMX1BO60663 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.98□□□□□ -1.93
LMX1BO60663 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
LMX1BO60663 Y_RNA.67-201ENST00000362870 100 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LMX1BO60663 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
LMX1BO60663 snosnR66.1-201ENST00000391095 99 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 Z99755.1-201ENST00000414048 380 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 AL356968.1-201ENST00000416622 474 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 HSPE1P1-201ENST00000421494 318 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 RPL7P46-201ENST00000425129 740 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.98□□□□□ -1.93
LMX1BO60663 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.98□□□□□ -1.93
LMX1BO60663 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.98□□□□□ -1.93
LMX1BO60663 HMGB3P11-201ENST00000440127 604 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 PRPS1P1-201ENST00000445305 876 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.98□□□□□ -1.93
LMX1BO60663 AL118496.2-201ENST00000448300 230 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 HMGB3P30-201ENST00000457863 606 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 U3.44-201ENST00000458938 192 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 AC008481.1-201ENST00000463278 396 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LMX1BO60663 RBBP4P6-201ENST00000508098 202 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.98□□□□□ -1.93
LMX1BO60663 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.98□□□□□ -1.93
LMX1BO60663 SNORA19.2-201ENST00000516013 114 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 RNU6-685P-201ENST00000517088 95 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 RN7SKP256-201ENST00000517201 314 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.98□□□□□ -1.93
LMX1BO60663 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.98□□□□□ -1.93
LMX1BO60663 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.98□□□□□ -1.93
LMX1BO60663 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.98□□□□□ -1.93
LMX1BO60663 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.98□□□□□ -1.93
LMX1BO60663 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.98□□□□□ -1.93
LMX1BO60663 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
LMX1BO60663 AC005498.1-201ENST00000592125 465 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.98□□□□□ -1.93
LMX1BO60663 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.98□□□□□ -1.93
LMX1BO60663 AC007687.1-201ENST00000602704 304 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 HMGN2P28-201ENST00000606102 262 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 uc_338.5-201ENST00000611839 155 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 AL390240.1-201ENST00000612950 384 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.98□□□□□ -1.93
LMX1BO60663 RMST_7.1-201ENST00000621935 268 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.98□□□□□ -1.93
LMX1BO60663 AC090574.1-201ENST00000623186 233 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 AC006065.5-201ENST00000623427 349 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 MIR1302-1-201ENST00000637932 143 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
LMX1BO60663 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
LMX1BO60663 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LMX1BO60663 AL365361.1-201ENST00000566942 3481 ntBASIC2.98□□□□□ -1.93
LMX1BO60663 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.97□□□□□ -1.93
LMX1BO60663 API5P2-201ENST00000397055 1498 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.97□□□□□ -1.93
LMX1BO60663 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMX1BO60663 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
LMX1BO60663 AC103710.2-202ENST00000641454 2853 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
LMX1BO60663 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMX1BO60663 Y_RNA.100-201ENST00000363141 102 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 SNORA23-201ENST00000365128 182 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 RNU6-946P-201ENST00000383878 107 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 Y_RNA.460-201ENST00000384255 102 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 MIR128-1-201ENST00000384921 82 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 SNORD37.1-201ENST00000390968 65 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 RNU6-550P-201ENST00000391057 101 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMX1BO60663 AL356057.2-201ENST00000403318 432 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AL606923.1-201ENST00000406616 190 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 RNU4-26P-201ENST00000410270 107 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AC009161.1-201ENST00000417306 376 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AC099677.1-201ENST00000420575 175 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 RPL23AP82-202ENST00000427528 469 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AC005326.1-201ENST00000429197 123 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.97□□□□□ -1.93
LMX1BO60663 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.97□□□□□ -1.93
LMX1BO60663 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.97□□□□□ -1.93
LMX1BO60663 RBMY2UP-201ENST00000453474 324 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.97□□□□□ -1.93
LMX1BO60663 RNU6-1208P-201ENST00000459588 107 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 CENPBD1P1-201ENST00000464061 469 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AC008155.2-201ENST00000464337 397 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 RN7SL442P-201ENST00000473804 320 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AC021205.2-201ENST00000480069 347 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 RPS4XP22-201ENST00000480755 780 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms