Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX3O60493 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX3O60493 MORF4L1P6-201ENST00000418771 268 ntBASIC2.75□□□□□ -1.97
SNX3O60493 HMGN2P30-201ENST00000423237 256 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AC010975.2-201ENST00000427781 588 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AL591704.1-201ENST00000432574 275 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX3O60493 NANOGNBP1-201ENST00000448444 480 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AC093392.2-201ENST00000450682 337 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX3O60493 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX3O60493 RN7SL293P-201ENST00000481765 281 ntBASIC2.75□□□□□ -1.97
SNX3O60493 RPL36AP51-201ENST00000487216 318 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AC023194.1-201ENST00000493084 308 ntBASIC2.75□□□□□ -1.97
SNX3O60493 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SNX3O60493 AC091133.4-201ENST00000511142 308 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.75□□□□□ -1.97
SNX3O60493 SNORD27.1-201ENST00000516319 72 ntBASIC2.75□□□□□ -1.97
SNX3O60493 RNU1-103P-201ENST00000516502 125 ntBASIC2.75□□□□□ -1.97
SNX3O60493 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.75□□□□□ -1.97
SNX3O60493 AC026403.1-201ENST00000518938 295 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AP003122.3-201ENST00000526316 255 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX3O60493 AC084851.1-201ENST00000529105 249 ntBASIC2.75□□□□□ -1.97
SNX3O60493 ADI1P3-201ENST00000549509 470 ntBASIC2.75□□□□□ -1.97
SNX3O60493 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.75□□□□□ -1.97
SNX3O60493 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.75□□□□□ -1.97
SNX3O60493 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX3O60493 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.75□□□□□ -1.97
SNX3O60493 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.75□□□□□ -1.97
SNX3O60493 AC060766.3-201ENST00000591442 263 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX3O60493 AL022154.1-201ENST00000604698 785 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AC012468.1-201ENST00000604888 430 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AL359547.2-201ENST00000615810 418 ntBASIC2.75□□□□□ -1.97
SNX3O60493 CR392039.5-201ENST00000623201 510 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AL157786.1-207ENST00000627771 695 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AL034408.1-202ENST00000636088 415 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AC103710.2-202ENST00000641454 2853 ntBASIC2.75□□□□□ -1.97
SNX3O60493 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SNX3O60493 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SNX3O60493 AC091564.4-201ENST00000533934 2194 ntBASIC2.74□□□□□ -1.97
SNX3O60493 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SNX3O60493 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SNX3O60493 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.74□□□□□ -1.97
SNX3O60493 Y_RNA.296-201ENST00000364930 108 ntBASIC2.74□□□□□ -1.97
SNX3O60493 RNU1-73P-201ENST00000383971 164 ntBASIC2.74□□□□□ -1.97
SNX3O60493 CISD1P1-201ENST00000393907 327 ntBASIC2.74□□□□□ -1.97
SNX3O60493 GSTA9P-201ENST00000406231 611 ntBASIC2.74□□□□□ -1.97
SNX3O60493 RN7SKP220-201ENST00000410611 288 ntBASIC2.74□□□□□ -1.97
SNX3O60493 RNU4-47P-201ENST00000410876 114 ntBASIC2.74□□□□□ -1.97
SNX3O60493 AC080125.1-201ENST00000414888 684 ntBASIC2.74□□□□□ -1.97
SNX3O60493 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX3O60493 AC104332.2-201ENST00000429959 156 ntBASIC2.74□□□□□ -1.97
SNX3O60493 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.74□□□□□ -1.97
SNX3O60493 AL451074.3-201ENST00000437709 472 ntBASIC2.74□□□□□ -1.97
SNX3O60493 RPL23AP20-201ENST00000447965 421 ntBASIC2.74□□□□□ -1.97
SNX3O60493 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.74□□□□□ -1.97
SNX3O60493 AC092798.1-201ENST00000458542 409 ntBASIC2.74□□□□□ -1.97
SNX3O60493 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX3O60493 AP002812.1-201ENST00000495378 474 ntBASIC2.74□□□□□ -1.97
SNX3O60493 RPS27AP10-201ENST00000496103 208 ntBASIC2.74□□□□□ -1.97
SNX3O60493 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.74□□□□□ -1.97
SNX3O60493 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.74□□□□□ -1.97
SNX3O60493 MTND2P33-201ENST00000506452 1031 ntBASIC2.74□□□□□ -1.97
SNX3O60493 AC114786.4-201ENST00000508771 728 ntBASIC2.74□□□□□ -1.97
SNX3O60493 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX3O60493 RAC1P5-201ENST00000512182 576 ntBASIC2.74□□□□□ -1.97
SNX3O60493 OR5AL2P-201ENST00000532185 920 ntBASIC2.74□□□□□ -1.97
SNX3O60493 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.74□□□□□ -1.97
SNX3O60493 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX3O60493 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX3O60493 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX3O60493 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX3O60493 AC008521.1-201ENST00000587471 187 ntBASIC2.74□□□□□ -1.97
SNX3O60493 AC024220.1-201ENST00000603675 484 ntBASIC2.74□□□□□ -1.97
SNX3O60493 AC025449.1-201ENST00000603896 529 ntBASIC2.74□□□□□ -1.97
SNX3O60493 AC004852.3-201ENST00000614131 326 ntBASIC2.74□□□□□ -1.97
SNX3O60493 AC039056.2-201ENST00000622261 511 ntBASIC2.74□□□□□ -1.97
SNX3O60493 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX3O60493 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SNX3O60493 AC110079.1-202ENST00000635213 138 ntBASIC2.74□□□□□ -1.97
SNX3O60493 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SNX3O60493 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
SNX3O60493 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SNX3O60493 AL049781.1-201ENST00000623195 3585 ntBASIC2.74□□□□□ -1.97
SNX3O60493 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.73□□□□□ -1.97
SNX3O60493 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNX3O60493 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNX3O60493 MTND5P17-201ENST00000418405 1603 ntBASIC2.73□□□□□ -1.97
SNX3O60493 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.73□□□□□ -1.97
SNX3O60493 Y_RNA.159-201ENST00000363674 87 ntBASIC2.73□□□□□ -1.97
SNX3O60493 SNORA62.1-201ENST00000364287 154 ntBASIC2.73□□□□□ -1.97
SNX3O60493 RNU6-1027P-201ENST00000383998 107 ntBASIC2.73□□□□□ -1.97
SNX3O60493 RNU6-259P-201ENST00000383999 107 ntBASIC2.73□□□□□ -1.97
SNX3O60493 Y_RNA.576-201ENST00000384781 102 ntBASIC2.73□□□□□ -1.97
SNX3O60493 MIR554-201ENST00000384874 96 ntBASIC2.73□□□□□ -1.97
SNX3O60493 MIR301A-201ENST00000385261 86 ntBASIC2.73□□□□□ -1.97
SNX3O60493 MIR454-201ENST00000390180 115 ntBASIC2.73□□□□□ -1.97
SNX3O60493 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms