Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 MRPS36P1-201ENST00000421291 307 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.46□□□□□ -2.18
SSNA1O43805 MTND2P29-201ENST00000438595 412 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 AL360221.1-201ENST00000445989 335 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 AL137159.1-201ENST00000452808 512 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.46□□□□□ -2.18
SSNA1O43805 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.46□□□□□ -2.18
SSNA1O43805 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.46□□□□□ -2.18
SSNA1O43805 RNU6-150P-201ENST00000516237 95 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 RN7SKP258-201ENST00000517151 304 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.46□□□□□ -2.18
SSNA1O43805 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.46□□□□□ -2.18
SSNA1O43805 OR5B19P-201ENST00000531766 928 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.46□□□□□ -2.18
SSNA1O43805 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.46□□□□□ -2.18
SSNA1O43805 AC104581.2-201ENST00000572227 430 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 DNAJC19P3-201ENST00000594491 331 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 AC005776.1-201ENST00000603164 290 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 AC005000.2-201ENST00000605468 310 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.46□□□□□ -2.18
SSNA1O43805 CDC27P3-201ENST00000635418 1910 ntBASIC1.46□□□□□ -2.18
SSNA1O43805 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
SSNA1O43805 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SSNA1O43805 AC092447.10-201ENST00000620607 1652 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SSNA1O43805 RNA5SP289-201ENST00000362332 137 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 SNORA71.3-201ENST00000362582 128 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 RNU6-7-201ENST00000364784 107 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 RNU6-8-201ENST00000365467 107 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
SSNA1O43805 AL023284.1-201ENST00000403956 276 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.45□□□□□ -2.18
SSNA1O43805 AC092017.2-201ENST00000427600 362 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.45□□□□□ -2.18
SSNA1O43805 KATNBL1P6-201ENST00000453433 915 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 SNORA84-201ENST00000459229 133 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 RPL37P6-201ENST00000460682 294 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 AP001486.1-201ENST00000463339 476 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 AC007182.2-201ENST00000489251 402 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 SLC25A15P5-201ENST00000508033 253 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SSNA1O43805 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.45□□□□□ -2.18
SSNA1O43805 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.45□□□□□ -2.18
SSNA1O43805 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.45□□□□□ -2.18
SSNA1O43805 AC087897.1-201ENST00000550134 156 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 MIR3912-201ENST00000577566 105 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.45□□□□□ -2.18
SSNA1O43805 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.45□□□□□ -2.18
SSNA1O43805 ELOCP5-201ENST00000604924 333 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 AC018638.7-201ENST00000605836 1114 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 AC034229.4-201ENST00000607861 441 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 AC103710.1-201ENST00000610003 901 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 AC092192.1-201ENST00000633154 1018 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 U6.99-201ENST00000637524 83 ntBASIC1.45□□□□□ -2.18
SSNA1O43805 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.44□□□□□ -2.18
SSNA1O43805 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SSNA1O43805 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SSNA1O43805 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 U8.3-201ENST00000363321 132 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 RNU5B-4P-201ENST00000363508 111 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 RNU6-236P-201ENST00000363886 106 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 RNU6-188P-201ENST00000364207 107 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 RNA5SP212-201ENST00000391223 107 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.44□□□□□ -2.18
SSNA1O43805 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.44□□□□□ -2.18
SSNA1O43805 USP9YP15-201ENST00000442391 422 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.44□□□□□ -2.18
SSNA1O43805 AC108938.1-201ENST00000451204 136 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 RNU1-98P-201ENST00000458992 160 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 AC006512.1-201ENST00000468816 291 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 AC104563.1-201ENST00000476147 376 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 AC093801.2-201ENST00000503966 1050 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 AC116655.1-201ENST00000508324 901 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 AC096745.1-201ENST00000509945 370 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.44□□□□□ -2.18
SSNA1O43805 AC008834.1-201ENST00000511612 175 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 CYCSP27-201ENST00000527643 293 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 AP005435.4-201ENST00000529514 284 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SSNA1O43805 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.44□□□□□ -2.18
SSNA1O43805 AC093012.1-202ENST00000549403 582 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.44□□□□□ -2.18
SSNA1O43805 PSMA3P-201ENST00000555485 635 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.44□□□□□ -2.18
SSNA1O43805 AL356432.3-201ENST00000568952 465 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.44□□□□□ -2.18
SSNA1O43805 SNRPGP17-201ENST00000603780 214 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 AL354696.1-201ENST00000614652 497 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 MIR6134-201ENST00000617606 109 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 AC008121.3-201ENST00000618726 433 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 YWHAEP7-203ENST00000622054 312 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.44□□□□□ -2.18
SSNA1O43805 AP000776.1-201ENST00000530032 1663 ntBASIC1.44□□□□□ -2.18
SSNA1O43805 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.44□□□□□ -2.18
SSNA1O43805 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SSNA1O43805 Y_RNA.126-201ENST00000363382 111 ntBASIC1.43□□□□□ -2.18
SSNA1O43805 RNU6-1280P-201ENST00000365211 107 ntBASIC1.43□□□□□ -2.18
SSNA1O43805 RN7SKP32-201ENST00000410167 303 ntBASIC1.43□□□□□ -2.18
SSNA1O43805 POLHP1-201ENST00000411806 470 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms