Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AL355598.1-201ENST00000604169 202 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 AC018638.7-201ENST00000605836 1114 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 AP005229.2-201ENST00000609980 697 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 MIR8081-201ENST00000611533 95 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 AC087241.4-201ENST00000612441 480 ntBASIC1.25□□□□□ -2.21
HMGB3O15347 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
HMGB3O15347 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.25□□□□□ -2.21
HMGB3O15347 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HMGB3O15347 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMGB3O15347 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGB3O15347 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HMGB3O15347 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
HMGB3O15347 Y_RNA.25-201ENST00000362528 102 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 RNU6-216P-201ENST00000363282 104 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 RNU6-338P-201ENST00000383888 105 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 RPL22P22-201ENST00000395439 379 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 TXNP7-201ENST00000406296 293 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 AC009310.1-201ENST00000414414 451 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 AL353621.1-201ENST00000418219 243 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGB3O15347 AL139415.2-201ENST00000431968 163 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.24□□□□□ -2.21
HMGB3O15347 KATNBL1P6-201ENST00000453433 915 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 MTND1P9-201ENST00000453775 944 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGB3O15347 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGB3O15347 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGB3O15347 FAM206BP-201ENST00000510179 541 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGB3O15347 SNORA25.11-201ENST00000515935 105 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 RNU6-927P-201ENST00000516199 100 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 SNORA44.1-201ENST00000517031 108 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.24□□□□□ -2.21
HMGB3O15347 MRPS36P5-201ENST00000551909 298 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 IMMP1LP2-201ENST00000552954 492 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGB3O15347 AL356432.3-201ENST00000568952 465 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 SNRPGP17-201ENST00000603780 214 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 AC084768.2-201ENST00000622736 221 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 IGHVIII-44-202ENST00000636235 289 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGB3O15347 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.24□□□□□ -2.21
HMGB3O15347 AC091812.1-201ENST00000432235 1948 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 RNU6-792P-201ENST00000363490 107 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
HMGB3O15347 MIR320A-201ENST00000385302 82 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 AL591034.2-201ENST00000402839 359 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 RNU2-68P-201ENST00000410878 191 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 AC127391.1-201ENST00000411737 98 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGB3O15347 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGB3O15347 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 AC010153.1-201ENST00000432862 727 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.23□□□□□ -2.21
HMGB3O15347 AL357134.1-201ENST00000445848 426 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 RPL7P55-201ENST00000450522 746 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 snoU13.8-201ENST00000458890 104 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.23□□□□□ -2.21
HMGB3O15347 SLC25A15P5-201ENST00000508033 253 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 AC008628.1-201ENST00000508663 265 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 CYB5AP5-201ENST00000549779 389 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 AC138915.2-201ENST00000569776 97 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 AC108479.2-201ENST00000617314 601 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 AC010975.3-201ENST00000618727 978 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 AC019226.1-201ENST00000625666 515 ntBASIC1.23□□□□□ -2.21
HMGB3O15347 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HMGB3O15347 AL161722.3-201ENST00000605789 2983 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.22□□□□□ -2.21
HMGB3O15347 AL590084.2-201ENST00000401481 382 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 MIR1304-201ENST00000408243 91 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HMGB3O15347 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 AL353706.1-201ENST00000436728 494 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 AC007677.1-201ENST00000445757 515 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.22□□□□□ -2.21
HMGB3O15347 MRPL42P4-201ENST00000453267 443 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 USP9YP10-201ENST00000454868 628 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 HMGN2P23-201ENST00000456759 269 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 AC008481.1-201ENST00000463278 396 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 RPL30P9-201ENST00000465586 330 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.22□□□□□ -2.21
HMGB3O15347 FO393415.2-201ENST00000480085 343 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGB3O15347 RNU6-362P-201ENST00000516736 90 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 RNU6-714P-201ENST00000516963 103 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 AC023632.1-201ENST00000518463 375 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 AP001189.2-201ENST00000527320 189 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGB3O15347 MIR4789-201ENST00000577469 82 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 AC103710.2-201ENST00000609912 942 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 AC009268.2-201ENST00000621925 457 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 AC110994.2-201ENST00000635481 492 ntBASIC1.22□□□□□ -2.21
HMGB3O15347 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMGB3O15347 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMGB3O15347 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMGB3O15347 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGB3O15347 RNU1-62P-201ENST00000362599 164 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 RNU1-23P-201ENST00000363361 144 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 RNU6-253P-201ENST00000384730 105 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms