Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 DPPA3P3-201ENST00000603842 430 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AL450336.1-201ENST00000605180 586 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AC107214.2-201ENST00000608204 634 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AC069294.1-201ENST00000608397 350 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AC092574.1-201ENST00000609771 420 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AL133445.2-201ENST00000611191 527 ntBASIC1.93□□□□□ -2.1
DFFAO00273 DUSP12P1-201ENST00000612874 516 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AC109809.1-201ENST00000619665 545 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AP000676.3-201ENST00000623299 569 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AC116618.1-201ENST00000634617 774 ntBASIC1.93□□□□□ -2.1
DFFAO00273 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
DFFAO00273 AL139397.2-201ENST00000404529 772 ntBASIC1.92□□□□□ -2.1
DFFAO00273 USP9YP33-201ENST00000412220 421 ntBASIC1.92□□□□□ -2.1
DFFAO00273 AC003685.2-201ENST00000422795 395 ntBASIC1.92□□□□□ -2.1
DFFAO00273 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.92□□□□□ -2.1
DFFAO00273 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.92□□□□□ -2.1
DFFAO00273 USP9YP35-201ENST00000435696 412 ntBASIC1.92□□□□□ -2.1
DFFAO00273 UBE2FP3-201ENST00000436366 524 ntBASIC1.92□□□□□ -2.1
DFFAO00273 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.92□□□□□ -2.1
DFFAO00273 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.92□□□□□ -2.1
DFFAO00273 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.92□□□□□ -2.1
DFFAO00273 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.92□□□□□ -2.1
DFFAO00273 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.92□□□□□ -2.1
DFFAO00273 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.92□□□□□ -2.1
DFFAO00273 UBL5P3-201ENST00000475112 231 ntBASIC1.92□□□□□ -2.1
DFFAO00273 AC034222.1-201ENST00000494052 532 ntBASIC1.92□□□□□ -2.1
DFFAO00273 AC026801.1-201ENST00000497178 464 ntBASIC1.92□□□□□ -2.1
DFFAO00273 MIR892C-201ENST00000516410 77 ntBASIC1.92□□□□□ -2.1
DFFAO00273 MIR514B-201ENST00000516774 80 ntBASIC1.92□□□□□ -2.1
DFFAO00273 RN7SKP258-201ENST00000517151 304 ntBASIC1.92□□□□□ -2.1
DFFAO00273 AC091163.3-201ENST00000518269 1144 ntBASIC1.92□□□□□ -2.1
DFFAO00273 MTND1P36-201ENST00000522384 936 ntBASIC1.92□□□□□ -2.1
DFFAO00273 AC093012.1-202ENST00000549403 582 ntBASIC1.92□□□□□ -2.1
DFFAO00273 AC110588.1-201ENST00000559699 137 ntBASIC1.92□□□□□ -2.1
DFFAO00273 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.92□□□□□ -2.1
DFFAO00273 BNIP3P27-201ENST00000599991 412 ntBASIC1.92□□□□□ -2.1
DFFAO00273 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.92□□□□□ -2.1
DFFAO00273 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.92□□□□□ -2.1
DFFAO00273 AL355598.1-201ENST00000604169 202 ntBASIC1.92□□□□□ -2.1
DFFAO00273 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.92□□□□□ -2.1
DFFAO00273 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
DFFAO00273 AP001486.3-201ENST00000615334 372 ntBASIC1.92□□□□□ -2.1
DFFAO00273 AC007490.1-201ENST00000624321 703 ntBASIC1.92□□□□□ -2.1
DFFAO00273 AC097655.1-201ENST00000635075 318 ntBASIC1.92□□□□□ -2.1
DFFAO00273 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.92□□□□□ -2.1
DFFAO00273 ADAM3A-203ENST00000461344 2157 ntBASIC1.92□□□□□ -2.1
DFFAO00273 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.91□□□□□ -2.1
DFFAO00273 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
DFFAO00273 MTCO1P17-201ENST00000411522 491 ntBASIC1.91□□□□□ -2.1
DFFAO00273 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.91□□□□□ -2.1
DFFAO00273 AL353729.1-201ENST00000425044 720 ntBASIC1.91□□□□□ -2.1
DFFAO00273 RPS25P9-201ENST00000435591 252 ntBASIC1.91□□□□□ -2.1
DFFAO00273 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.91□□□□□ -2.1
DFFAO00273 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.91□□□□□ -2.1
DFFAO00273 ELOCP30-201ENST00000447108 299 ntBASIC1.91□□□□□ -2.1
DFFAO00273 MTCO1P27-201ENST00000448269 226 ntBASIC1.91□□□□□ -2.1
DFFAO00273 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.91□□□□□ -2.1
DFFAO00273 FABP5P15-201ENST00000453566 214 ntBASIC1.91□□□□□ -2.1
DFFAO00273 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
DFFAO00273 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
DFFAO00273 AC108729.1-201ENST00000487812 947 ntBASIC1.91□□□□□ -2.1
DFFAO00273 AC007182.2-201ENST00000489251 402 ntBASIC1.91□□□□□ -2.1
DFFAO00273 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
DFFAO00273 AC096571.1-202ENST00000506634 735 ntBASIC1.91□□□□□ -2.1
DFFAO00273 MRPS36P5-201ENST00000551909 298 ntBASIC1.91□□□□□ -2.1
DFFAO00273 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.91□□□□□ -2.1
DFFAO00273 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.91□□□□□ -2.1
DFFAO00273 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.91□□□□□ -2.1
DFFAO00273 AC009712.1-201ENST00000564938 316 ntBASIC1.91□□□□□ -2.1
DFFAO00273 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
DFFAO00273 MIR4765-201ENST00000585007 77 ntBASIC1.91□□□□□ -2.1
DFFAO00273 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.91□□□□□ -2.1
DFFAO00273 AC091152.3-201ENST00000604227 325 ntBASIC1.91□□□□□ -2.1
DFFAO00273 AC004908.2-201ENST00000609090 574 ntBASIC1.91□□□□□ -2.1
DFFAO00273 AC009318.2-201ENST00000610917 651 ntBASIC1.91□□□□□ -2.1
DFFAO00273 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
DFFAO00273 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.91□□□□□ -2.1
DFFAO00273 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
DFFAO00273 DUXAP9-208ENST00000622815 614 ntBASIC1.91□□□□□ -2.1
DFFAO00273 PISRT1-201ENST00000626175 531 ntBASIC1.91□□□□□ -2.1
DFFAO00273 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.91□□□□□ -2.1
DFFAO00273 AC106858.1-201ENST00000637497 429 ntBASIC1.91□□□□□ -2.1
DFFAO00273 ZNF355P-201ENST00000427301 3216 ntBASIC1.91□□□□□ -2.1
DFFAO00273 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
DFFAO00273 MTND5P33-201ENST00000571250 1450 ntBASIC1.9□□□□□ -2.11
DFFAO00273 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
DFFAO00273 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.9□□□□□ -2.11
DFFAO00273 HSPA8P4-201ENST00000511877 1920 ntBASIC1.9□□□□□ -2.11
DFFAO00273 RNU6-1000P-201ENST00000391066 106 ntBASIC1.9□□□□□ -2.11
DFFAO00273 ERHP2-201ENST00000402323 299 ntBASIC1.9□□□□□ -2.11
DFFAO00273 AL359634.1-202ENST00000404721 284 ntBASIC1.9□□□□□ -2.11
DFFAO00273 U6atac.2-201ENST00000408644 118 ntBASIC1.9□□□□□ -2.11
DFFAO00273 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.9□□□□□ -2.11
DFFAO00273 BX276092.3-201ENST00000424182 230 ntBASIC1.9□□□□□ -2.11
DFFAO00273 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.9□□□□□ -2.11
DFFAO00273 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.9□□□□□ -2.11
DFFAO00273 GPM6BP2-201ENST00000432046 144 ntBASIC1.9□□□□□ -2.11
DFFAO00273 RPL36AP53-201ENST00000432891 316 ntBASIC1.9□□□□□ -2.11
DFFAO00273 RSU1P2-202ENST00000437884 485 ntBASIC1.9□□□□□ -2.11
DFFAO00273 AL161651.1-201ENST00000440882 223 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms