Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL592447.1-201ENST00000447592 540 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC079448.1-201ENST00000449377 373 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC234775.1-201ENST00000454247 670 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AP000852.1-201ENST00000472460 573 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC105252.1-201ENST00000503089 286 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 MLLT10P2-201ENST00000506434 249 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 SNORA18.6-201ENST00000516792 115 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC022878.1-201ENST00000530684 149 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AP002453.2-201ENST00000533503 320 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 HMGB1P6-201ENST00000569046 646 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC004987.4-201ENST00000603383 338 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC007038.2-201ENST00000608095 740 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC103710.2-201ENST00000609912 942 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AC245517.5-201ENST00000611529 162 ntBASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.32□□□□□ -2.04
TRIM49D1C9J1S8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 RNA5SP393-201ENST00000363423 117 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 Y_RNA.194-201ENST00000363985 102 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 RNU6-188P-201ENST00000364207 107 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 SNORA23-201ENST00000365128 182 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 RNY3P13-201ENST00000365542 102 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 Y_RNA.381-201ENST00000365666 102 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 Y_RNA.500-201ENST00000384466 111 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AL139397.2-201ENST00000404529 772 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 CDK8P2-201ENST00000415020 547 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AL353777.1-201ENST00000425552 326 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC009961.2-201ENST00000435771 251 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 KATNBL1P3-201ENST00000443475 909 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 SSXP1-201ENST00000453640 473 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 MTCO2P18-201ENST00000457151 658 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AP1S2P1-201ENST00000457344 379 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 SNORA70.16-201ENST00000516390 95 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 RNA5SP337-201ENST00000517007 109 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC026241.1-201ENST00000517873 2142 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AP002963.1-201ENST00000530590 184 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC021269.2-201ENST00000532318 330 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC105137.2-201ENST00000569073 466 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 MIR3146-201ENST00000580367 79 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 MIR3162-201ENST00000581818 82 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 BNIP3P8-201ENST00000597863 560 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC007621.1-201ENST00000604544 437 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC087752.4-201ENST00000605911 462 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC103810.6-201ENST00000606708 136 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AP000254.1-201ENST00000609934 520 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC005332.10-201ENST00000612725 619 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC011890.2-201ENST00000613393 294 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 TUG1_2.1-201ENST00000614234 87 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC136475.10-201ENST00000620253 385 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC019226.1-201ENST00000625666 515 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 AC010149.2-201ENST00000637608 315 ntBASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM49D1C9J1S8 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 RNU6-76P-201ENST00000384060 104 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 RNU5A-2P-201ENST00000384337 116 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 SNORD116-4-201ENST00000384733 96 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 MIR196B-201ENST00000384852 84 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 SNORD115.1-201ENST00000391109 76 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AC068050.1-201ENST00000394891 380 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AL136372.1-201ENST00000403060 228 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 FCF1P10-201ENST00000407590 479 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 Y_RNA.598-201ENST00000410480 95 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 RNU2-66P-201ENST00000410650 161 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 RNU2-25P-201ENST00000411041 191 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 RNU6-516P-201ENST00000411381 104 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 RPL23AP30-201ENST00000432419 501 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AC005094.1-201ENST00000440420 368 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AL109933.2-201ENST00000452651 260 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AL359385.1-201ENST00000456509 365 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 RNA5SP269-201ENST00000459032 137 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 SNORD42A-201ENST00000459584 64 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AC010631.1-201ENST00000474150 156 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 RPL31P60-201ENST00000478450 367 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms