Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AC009097.3-201ENST00000563557 1018 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AC090079.2-201ENST00000575289 768 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 BNIP3P23-201ENST00000599655 511 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AL109918.3-201ENST00000603072 338 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AL355297.2-201ENST00000604792 129 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 PART1_2.1-201ENST00000612397 250 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AL109620.1-201ENST00000618738 1197 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AL138955.1-201ENST00000622881 1040 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AC091932.3-201ENST00000624223 323 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AP000553.5-201ENST00000641933 54 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 CDC27P3-201ENST00000635418 1910 ntBASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RHBDD3Q9Y3P4 TEX21P-201ENST00000447107 1476 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 AC104454.1-201ENST00000421341 1401 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 MIR19A-201ENST00000384878 82 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 AL512604.1-201ENST00000404812 257 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 BRK1P2-201ENST00000442875 223 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 EEF1E1P1-201ENST00000446998 430 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 AC022493.1-201ENST00000492984 337 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 RPF2P2-201ENST00000504693 896 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 RNA5SP281-201ENST00000516504 135 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 MTCYBP20-201ENST00000524239 1129 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 AL596327.1-201ENST00000603629 213 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 DPPA3P3-201ENST00000603842 430 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 RNU6-91P-201ENST00000607774 107 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 AL627230.6-201ENST00000611129 280 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 AP006437.1-201ENST00000641440 3685 ntBASIC1.94□□□□□ -2.1
RHBDD3Q9Y3P4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 RNU6-512P-201ENST00000364438 103 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 MIR95-201ENST00000385072 81 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 SNORA40.19-201ENST00000390846 128 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 MTCO1P53-201ENST00000441633 699 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AL591719.1-201ENST00000444669 744 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AL358794.1-201ENST00000445689 381 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AC090515.1-201ENST00000465295 476 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AC090255.1-201ENST00000495779 349 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AC079598.5-201ENST00000547460 117 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AC022662.1-201ENST00000580252 331 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AC073544.2-201ENST00000601155 540 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AF131215.7-201ENST00000602443 707 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 MIR6134-201ENST00000617606 109 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AC013470.4-201ENST00000619978 986 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 AC093591.3-201ENST00000634516 308 ntBASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
RHBDD3Q9Y3P4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 RNU6-1159P-201ENST00000362933 107 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 SNORA51.11-201ENST00000384442 131 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 SNORD116-12-201ENST00000384468 92 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 SNORA67.4-201ENST00000384688 142 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 RNU6-278P-201ENST00000390945 109 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 SDR42E1P3-201ENST00000438345 502 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AL161788.1-201ENST00000441805 169 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 OR6C5P-201ENST00000452388 923 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 MTCO1P42-201ENST00000457379 726 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 SMURF2P1-201ENST00000514992 481 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 RNU6-1183P-201ENST00000517054 60 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms