Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AL139395.1-201ENST00000603662 160 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AC018690.1-201ENST00000608144 626 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 MIR7106-201ENST00000612419 65 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AC091953.2-201ENST00000623979 160 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AL669831.3-213ENST00000636676 183 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AL596275.2-204ENST00000641628 552 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AL596275.2-206ENST00000641957 626 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 Y_RNA.367-201ENST00000365544 101 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 RNU6-38P-201ENST00000384085 107 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 RNU6-890P-201ENST00000384121 107 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AL590135.1-201ENST00000422215 156 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AC004383.1-201ENST00000438135 289 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 SNORD127-201ENST00000458892 86 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 RNU6-333P-201ENST00000459117 107 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 CREM-226ENST00000469949 721 ntTSL 3 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 RPL31P50-201ENST00000471002 296 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 RNU6-699P-201ENST00000517081 110 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 MIR3146-201ENST00000580367 79 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AC090525.3-201ENST00000605601 189 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AC007656.2-201ENST00000624902 4547 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 RNU6-770P-201ENST00000363929 105 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 Y_RNA.210-201ENST00000364161 110 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 RNU1-115P-201ENST00000365329 160 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 Y_RNA.785-201ENST00000384290 109 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 MIR514A2-201ENST00000385131 88 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 MIR514A3-201ENST00000385132 88 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AL133384.1-201ENST00000412744 351 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 MYL8P-204ENST00000431574 518 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 RNU6-408P-201ENST00000515910 100 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 RNU6-1023P-201ENST00000516137 106 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 RNA5SP454-201ENST00000517231 127 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AC022868.1-201ENST00000517767 391 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 HIGD1AP6-201ENST00000521833 279 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AC090751.1-201ENST00000566966 267 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 KLKP1-201ENST00000595979 403 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AC096772.1-201ENST00000609146 564 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AL606534.2-204ENST00000635008 178 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AP000553.6-201ENST00000641242 118 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AC005183.1-201ENST00000603687 1979 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 UBE3AP2-201ENST00000429033 2259 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 RNU6-450P-201ENST00000364654 107 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 RNU2-29P-201ENST00000410423 189 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AC073069.1-201ENST00000428657 441 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AL138799.3-201ENST00000438968 350 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 PRPS1P1-201ENST00000445305 876 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 HMGB3P30-201ENST00000457863 606 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 MIR5004-201ENST00000579078 107 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 MIR3128-201ENST00000581957 66 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 BNIP3P25-201ENST00000596023 559 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AL008729.2-201ENST00000606393 473 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 AC103858.2-201ENST00000621471 543 ntBASIC2.69□□□□□ -1.98
NOTCH3Q9UM47 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms