Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 FGF7P2-201ENST00000332473 296 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 RNY3P13-201ENST00000365542 102 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 SNORD116-9-201ENST00000384000 95 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 SNORD116-3-201ENST00000384287 95 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 SNORD116-7-201ENST00000384404 95 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 SNORD116-5-201ENST00000384462 95 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 TXNP7-201ENST00000406296 293 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 Y_RNA.598-201ENST00000410480 95 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC009963.1-201ENST00000417265 157 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 RPL7L1P10-201ENST00000427790 463 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 MTND4P32-201ENST00000437189 1237 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 MTATP6P30-201ENST00000443540 664 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 MTND2P24-201ENST00000453434 806 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 SSXP1-201ENST00000453640 473 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC010631.1-201ENST00000474150 156 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 RPL23AP70-201ENST00000483361 460 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 TTC39CP1-201ENST00000512513 755 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 MIR4293-201ENST00000584305 78 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 BNIP3P8-201ENST00000597863 560 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC119751.7-201ENST00000600494 245 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC073544.2-201ENST00000601155 540 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AP000860.1-201ENST00000605250 559 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC097065.2-201ENST00000608159 533 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC010133.1-201ENST00000615809 842 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC010297.1-201ENST00000623948 149 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AL603839.4-201ENST00000624658 1005 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 AC093536.2-201ENST00000565257 1406 ntBASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.49□□□□□ -2.01
APOBEC3BQ9UH17 RNU6-223P-201ENST00000362830 107 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 RNU1-100P-201ENST00000365255 165 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 RNU6-297P-201ENST00000384636 107 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 MIR518C-201ENST00000384822 101 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 RNU6-278P-201ENST00000390945 109 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 SNORA40.3-201ENST00000390964 122 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 RNA5SP210-201ENST00000391034 120 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 HMGN1P14-201ENST00000412459 517 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 SPA17P1-201ENST00000416656 452 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 RPS15AP12-201ENST00000419498 388 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AC092573.2-201ENST00000434546 243 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 NDUFB4P6-201ENST00000436819 366 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AL360221.1-201ENST00000445989 335 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 RPL31P3-201ENST00000458430 332 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 MTND1P3-201ENST00000484956 952 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AC109329.2-201ENST00000519658 482 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 CASP1P1-201ENST00000526345 212 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AC007115.1-201ENST00000546853 234 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 RPL21P5-201ENST00000554662 472 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 KC877982.1-201ENST00000602313 470 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AC013553.2-201ENST00000604244 589 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AP000787.2-201ENST00000604432 568 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AC093783.1-201ENST00000612976 329 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 SDR42E1P2-201ENST00000614861 481 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AC008250.2-201ENST00000615261 205 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AC006338.1-201ENST00000618453 749 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 AC064859.1-201ENST00000624741 174 ntBASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
APOBEC3BQ9UH17 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBEC3BQ9UH17 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
APOBEC3BQ9UH17 AC008568.2-201ENST00000623862 2313 ntBASIC2.47□□□□□ -2.01
APOBEC3BQ9UH17 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
APOBEC3BQ9UH17 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
APOBEC3BQ9UH17 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
APOBEC3BQ9UH17 Y_RNA.77-201ENST00000362962 107 ntBASIC2.47□□□□□ -2.01
APOBEC3BQ9UH17 RPS4XP7-201ENST00000406274 780 ntBASIC2.47□□□□□ -2.01
APOBEC3BQ9UH17 RN7SKP140-201ENST00000411196 284 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms