Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 HMGN2P13-201ENST00000476476 274 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC117522.1-201ENST00000509821 380 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 SEPT14P4-201ENST00000513445 186 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 FO082796.1-201ENST00000523795 183 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 OR5AL2P-201ENST00000532185 920 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC005951.2-201ENST00000576282 495 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 FAM60BP-201ENST00000578364 658 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC012119.1-201ENST00000603184 222 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AL133393.1-201ENST00000603277 287 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC012443.1-201ENST00000605605 231 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AL008636.1-201ENST00000625038 1018 ntBASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SMARCAL1Q9NZC9 AC110774.1-201ENST00000623567 2018 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AL353743.1-202ENST00000431724 1695 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 MAPK10-362ENST00000641864 4484 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 TAB3P1-202ENST00000452645 1634 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AC073343.1-201ENST00000328239 651 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 SNORA72.1-201ENST00000363485 129 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 RNU6-960P-201ENST00000364056 120 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 RNA5SP72-201ENST00000364442 117 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 Y_RNA.255-201ENST00000364581 97 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 RNU6-996P-201ENST00000365438 107 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 MIR454-201ENST00000390180 115 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 UBE2V1P2-201ENST00000397758 440 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 MTATP6P4-201ENST00000427725 675 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AC005300.1-201ENST00000428401 373 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 MTCO3P18-201ENST00000440206 761 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 DDX3P2-201ENST00000446138 111 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AL356010.1-201ENST00000456364 102 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 snoU13.24-201ENST00000458998 104 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 RPL21P8-201ENST00000465083 535 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 RPL7P49-201ENST00000471402 708 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AC006483.1-201ENST00000487308 313 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 RN7SL633P-201ENST00000488974 297 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 MLLT10P2-201ENST00000506434 249 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AC098799.2-201ENST00000509466 868 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 RNA5SP468-201ENST00000516782 93 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 OR4H12P-201ENST00000556269 907 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AC024619.4-201ENST00000580924 316 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 MIR4775-201ENST00000581168 75 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AC060780.3-201ENST00000589464 80 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 BNIP3P30-201ENST00000601184 574 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AC092794.2-201ENST00000620933 563 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AL589994.2-201ENST00000621124 579 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AC009812.4-201ENST00000569134 1805 ntBASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMARCAL1Q9NZC9 ASNSP3-201ENST00000451989 1306 ntBASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 SMIM11P1-201ENST00000369586 178 ntBASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 SNORA24.1-201ENST00000384401 135 ntBASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 RNVU1-14-201ENST00000384770 164 ntBASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 RNU1-101P-201ENST00000391171 127 ntBASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 RAC1P6-201ENST00000423911 575 ntBASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 RPS29P6-201ENST00000438196 145 ntBASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 RPL37P4-201ENST00000448908 268 ntBASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 AC073415.1-201ENST00000449240 153 ntBASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 RPS24P6-201ENST00000452670 400 ntBASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 AL162395.1-201ENST00000457882 422 ntBASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 AL163973.1-201ENST00000484753 577 ntBASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 AC110794.1-201ENST00000505816 425 ntBASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCAL1Q9NZC9 AC004062.1-201ENST00000509926 645 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms