Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC104058.1-201ENST00000448028 297 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 Z99127.3-201ENST00000448158 395 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC125238.1-201ENST00000448842 249 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC106707.2-201ENST00000484182 374 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 RPL36AP51-201ENST00000487216 318 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC092436.1-201ENST00000506450 503 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 SNORD59.2-201ENST00000516873 68 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AL157871.3-201ENST00000557231 293 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 MIR3922-201ENST00000585192 84 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AL138889.2-201ENST00000603883 242 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AL670379.4-201ENST00000605279 254 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC126118.1-201ENST00000607744 628 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AL034408.1-202ENST00000636088 415 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 AC110774.1-201ENST00000623567 2018 ntBASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC6A13Q9NSD5 MAPK10-322ENST00000641485 4530 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 MIR148B-201ENST00000362252 99 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 RNA5SP387-201ENST00000364226 106 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-198P-201ENST00000384258 104 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 Y_RNA.554-201ENST00000384672 102 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 RNU1-101P-201ENST00000391171 127 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 SAR1AP2-201ENST00000392696 594 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 USP9YP6-201ENST00000413550 854 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AL158156.1-201ENST00000422509 473 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 RPS3AP44-201ENST00000425466 790 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 C8orf59P1-201ENST00000429930 303 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC073063.1-201ENST00000434352 607 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC073415.1-201ENST00000449240 153 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC115115.1-201ENST00000449927 248 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AL118520.1-201ENST00000450770 291 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC091179.1-201ENST00000461606 579 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 RPL7P49-201ENST00000471402 708 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC233702.1-201ENST00000482905 502 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 FCF1P8-201ENST00000510322 597 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AP005435.4-201ENST00000529514 284 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AK6P1-201ENST00000540219 478 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AL157687.1-201ENST00000554853 619 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AL391261.3-201ENST00000557194 520 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC027807.1-201ENST00000559921 996 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC025678.1-201ENST00000567861 338 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 MIR1273C-201ENST00000578669 77 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC006557.5-201ENST00000603126 811 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC069200.1-201ENST00000609511 323 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 uc_338.1-201ENST00000612113 180 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AL354950.2-201ENST00000617939 290 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 SNORD39.4-201ENST00000620099 78 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 U2.21-201ENST00000637295 81 ntBASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.11□□□□□ -1.91
SLC6A13Q9NSD5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 Y_RNA.9-201ENST00000362354 101 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 SNORA63.1-201ENST00000362493 131 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-552P-201ENST00000362869 119 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 Y_RNA.255-201ENST00000364581 97 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 SNORA14A-201ENST00000364773 135 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-395P-201ENST00000365662 106 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-116P-201ENST00000384042 109 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 CIR1P3-201ENST00000405137 479 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 SNORA11.1-201ENST00000408133 129 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 EEF1A1P40-201ENST00000412883 573 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 RPL26P27-201ENST00000414397 437 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AC063979.1-201ENST00000415539 377 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 HMGN2P30-201ENST00000423237 256 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AC091286.1-201ENST00000431233 461 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 CST9LP2-201ENST00000437612 320 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms