Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 RPL30P14-201ENST00000482744 348 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 EIF4EP3-201ENST00000498782 656 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 AMZ2P1-203ENST00000565833 850 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 MIR4444-1-201ENST00000581696 74 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 MIR4444-2-201ENST00000584390 74 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 RBM11P1-201ENST00000604951 799 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 AC004805.2-201ENST00000605382 482 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 U3.45-201ENST00000607547 219 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 AC017071.1-201ENST00000564407 2204 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
HINT3Q9NQE9 FAM35BP-202ENST00000497389 3337 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 RNU6-451P-201ENST00000362921 107 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HINT3Q9NQE9 RNU6-877P-201ENST00000383868 107 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 MIR301A-201ENST00000385261 86 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 AL139039.1-201ENST00000401900 692 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 RNA5SP293-201ENST00000410527 113 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 USP9YP6-201ENST00000413550 854 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 MTND1P23-201ENST00000416931 372 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 AC245291.1-201ENST00000419501 328 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 CYCSP4-201ENST00000429682 331 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 HMGN2P31-201ENST00000432430 273 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 RPL36AP53-201ENST00000432891 316 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 AC073063.1-201ENST00000434352 607 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 MTND4P14-201ENST00000435799 1354 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 SNRPEP9-201ENST00000436794 238 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 SETP5-201ENST00000437270 562 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 HMGB3P11-201ENST00000440127 604 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.06□□□□□ -1.92
HINT3Q9NQE9 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 RNU7-180P-201ENST00000459240 63 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 RPL32P34-201ENST00000486380 400 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.06□□□□□ -1.92
HINT3Q9NQE9 HSPA8P4-201ENST00000511877 1920 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.06□□□□□ -1.92
HINT3Q9NQE9 SNORA64.4-201ENST00000516632 81 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 RNU6-928P-201ENST00000516876 104 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 RNA5SP165-201ENST00000517142 115 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 RNU6-1315P-201ENST00000517187 99 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 SUB1P1-201ENST00000524415 382 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.06□□□□□ -1.92
HINT3Q9NQE9 HMGB1P14-201ENST00000557424 591 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 AL138976.2-201ENST00000563989 694 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 AC022336.2-201ENST00000568966 2538 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.06□□□□□ -1.92
HINT3Q9NQE9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HINT3Q9NQE9 MIR3609-201ENST00000582661 80 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 MIR4801-201ENST00000582704 82 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 FTX_3.1-201ENST00000610451 147 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 AL359693.1-201ENST00000614959 2407 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 AC002553.4-201ENST00000616896 331 ntBASIC3.06□□□□□ -1.92
HINT3Q9NQE9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.06□□□□□ -1.92
HINT3Q9NQE9 AL136164.4-201ENST00000625013 2135 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 ASNSP3-201ENST00000451989 1306 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 SNORD56.3-201ENST00000363507 71 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 RNU6-270P-201ENST00000364131 105 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 RNU6-805P-201ENST00000365643 106 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 RNU6-1035P-201ENST00000384477 107 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 MIR7-3-201ENST00000384898 110 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 SNORD37.1-201ENST00000390968 65 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AL606923.1-201ENST00000406616 190 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 EEF1A1P40-201ENST00000412883 573 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AC063979.1-201ENST00000415539 377 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 MTND1P2-201ENST00000430604 821 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 ATP5JP1-201ENST00000431631 322 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 RBMX2P4-201ENST00000441256 376 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 RPL21P23-201ENST00000446654 460 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 NFU1P2-201ENST00000448700 469 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 RPL12P25-201ENST00000455592 494 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AC012181.1-201ENST00000479895 423 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 MTCO3P9-201ENST00000506989 781 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AP003122.3-201ENST00000526316 255 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AC084851.1-201ENST00000529105 249 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms