Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC109809.1-201ENST00000619665 545 ntBASIC1.79□□□□□ -2.12
VCX3AQ9NNX9 MIR5739-201ENST00000619803 80 ntBASIC1.79□□□□□ -2.12
VCX3AQ9NNX9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VCX3AQ9NNX9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VCX3AQ9NNX9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VCX3AQ9NNX9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VCX3AQ9NNX9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 RNU6-560P-201ENST00000364007 108 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 Y_RNA.311-201ENST00000365068 96 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AL133475.1-201ENST00000404414 305 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AL512604.1-201ENST00000404812 257 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 USP9YP6-201ENST00000413550 854 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 RPL37P6-201ENST00000460682 294 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AC112771.1-201ENST00000463581 102 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 RPL23AP42-201ENST00000471152 471 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 CKS1BP2-201ENST00000497342 240 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 RPF2P2-201ENST00000504693 896 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AC092451.2-201ENST00000538746 658 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 MIR4697-201ENST00000582977 78 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 MIR4293-201ENST00000584305 78 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 MIR6817-201ENST00000615588 66 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AC107308.1-201ENST00000615897 301 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AC012150.2-201ENST00000621300 544 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 AL136313.1-201ENST00000624804 202 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 U6.99-201ENST00000637524 83 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 LINC02211-204ENST00000642024 1070 ntBASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VCX3AQ9NNX9 U3.13-201ENST00000364804 214 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 MIR34B-201ENST00000385076 84 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 NDUFS5P1-201ENST00000405668 289 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 MTCO1P17-201ENST00000411522 491 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 USP9YP33-201ENST00000412220 421 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 EIF1AXP1-201ENST00000419267 435 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 XKRYP1-201ENST00000423438 492 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 XKRYP2-201ENST00000432915 492 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 AC091390.1-201ENST00000433904 331 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 USP9YP35-201ENST00000435696 412 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 RPS3AP12-201ENST00000443616 753 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 RNA5SP137-201ENST00000516833 135 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 ACA59.2-201ENST00000517061 156 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 RNU6-64P-201ENST00000517119 105 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 AC027176.1-201ENST00000560204 514 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 MIR4299-201ENST00000577899 72 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 VN1R90P-201ENST00000595717 726 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 AL031274.2-201ENST00000599419 203 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 AL109918.3-201ENST00000603072 338 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 BNIP3P19-201ENST00000605397 577 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 RNU6-1192P-201ENST00000612197 107 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 RNU6-489P-201ENST00000618289 107 ntBASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
VCX3AQ9NNX9 CDC27P3-201ENST00000635418 1910 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 GSTA9P-201ENST00000406231 611 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 RNA5SP450-201ENST00000411206 102 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 RSU1P2-202ENST00000437884 485 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AL353689.1-201ENST00000438895 199 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 RPS15AP9-201ENST00000439856 381 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AL161788.1-201ENST00000441805 169 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 RNU7-59P-201ENST00000459101 61 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC018437.1-201ENST00000492214 406 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC116655.1-201ENST00000508324 901 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 SNORA19.3-201ENST00000516165 130 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 RNA5SP281-201ENST00000516504 135 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 RNA5SP148-201ENST00000516527 94 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 RNU6-678P-201ENST00000516832 109 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC079598.5-201ENST00000547460 117 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 MTND4LP25-201ENST00000570218 163 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC022662.1-201ENST00000580252 331 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 MIR3618-201ENST00000580330 88 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms